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Cluster: HRGMv2_3994_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3994_180 HRGMv2_3994_180_7 4106 5173 - 3.A.2.1.7
NULL(UNKNOWN) HRGMv2_3994_180 HRGMv2_3994_180_8 5192 5593 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3994_180 HRGMv2_3994_180_9 5617 5859 - ATP-synt_DE_N
TC HRGMv2_3994_180 HRGMv2_3994_180_10 5872 7401 - 3.A.2.1.2
pfam HRGMv2_3994_180 HRGMv2_3994_180_11 7536 8513 - PFK
TC HRGMv2_3994_180 HRGMv2_3994_180_12 8535 9725 - 2.A.62.1.3
NULL(UNKNOWN) HRGMv2_3994_180 HRGMv2_3994_180_13 9855 10079 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3994_180 HRGMv2_3994_180_14 10143 10658 + GT2
Gene ID: HRGMv2_3994_180_7
Type: TC
Location: 4106 - 5173 (-)
Gene ID: HRGMv2_3994_180_8
Type:
Location: 5192 - 5593 (-)
Gene ID: HRGMv2_3994_180_9
Type: pfam
Location: 5617 - 5859 (-)
Gene ID: HRGMv2_3994_180_10
Type: TC
Location: 5872 - 7401 (-)
Gene ID: HRGMv2_3994_180_11
Type: pfam
Location: 7536 - 8513 (-)
Gene ID: HRGMv2_3994_180_12
Type: TC
Location: 8535 - 9725 (-)
Gene ID: HRGMv2_3994_180_13
Type:
Location: 9855 - 10079 (-)
Gene ID: HRGMv2_3994_180_14
Type: CAZyme
Location: 10143 - 10658 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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