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Cluster: HRGMv2_3993_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3993_2 HRGMv2_3993_2_1 423 3707 - GH33
TC HRGMv2_3993_2 HRGMv2_3993_2_2 3755 5425 - 9.B.174.1.2
STP HRGMv2_3993_2 HRGMv2_3993_2_3 5451 6386 - PfkB
pfam HRGMv2_3993_2 HRGMv2_3993_2_4 6805 8097 + Inos-1-P_synth | NAD_binding_5
TC HRGMv2_3993_2 HRGMv2_3993_2_5 8351 10945 + 1.B.14.6.14
NULL(UNKNOWN) HRGMv2_3993_2 HRGMv2_3993_2_6 11025 11219 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3993_2 HRGMv2_3993_2_7 11694 11921 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3993_2 HRGMv2_3993_2_8 11918 13189 + 1.B.3.1.7
Gene ID: HRGMv2_3993_2_1
Type: CAZyme
Location: 423 - 3707 (-)
Gene ID: HRGMv2_3993_2_2
Type: TC
Location: 3755 - 5425 (-)
Gene ID: HRGMv2_3993_2_3
Type: STP
Location: 5451 - 6386 (-)
Gene ID: HRGMv2_3993_2_4
Type: pfam
Location: 6805 - 8097 (+)
Gene ID: HRGMv2_3993_2_5
Type: TC
Location: 8351 - 10945 (+)
Gene ID: HRGMv2_3993_2_6
Type:
Location: 11025 - 11219 (-)
Gene ID: HRGMv2_3993_2_7
Type:
Location: 11694 - 11921 (+)
Gene ID: HRGMv2_3993_2_8
Type: TC
Location: 11918 - 13189 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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