dbCAN Logo

Cluster: HRGMv2_3988_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3988_79 HRGMv2_3988_79_24 14413 14691 - 3.A.1.121.4
TC HRGMv2_3988_79 HRGMv2_3988_79_25 14688 16028 - 3.A.1.121.4
CAZyme HRGMv2_3988_79 HRGMv2_3988_79_26 16233 17024 + GH13_28
NULL(UNKNOWN) HRGMv2_3988_79 HRGMv2_3988_79_27 17054 17524 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3988_79 HRGMv2_3988_79_28 17837 18004 + Fer4 | Fer4
CAZyme HRGMv2_3988_79 HRGMv2_3988_79_29 18080 19066 - GH13_46
CAZyme HRGMv2_3988_79 HRGMv2_3988_79_30 19063 19983 - GH13_46
pfam HRGMv2_3988_79 HRGMv2_3988_79_31 20240 20881 + DUF3108
pfam HRGMv2_3988_79 HRGMv2_3988_79_32 21435 21968 + CD225 | GYF_2
TC HRGMv2_3988_79 HRGMv2_3988_79_33 21982 22566 + 8.A.58.2.7
Gene ID: HRGMv2_3988_79_24
Type: TC
Location: 14413 - 14691 (-)
Gene ID: HRGMv2_3988_79_25
Type: TC
Location: 14688 - 16028 (-)
Gene ID: HRGMv2_3988_79_26
Type: CAZyme
Location: 16233 - 17024 (+)
Gene ID: HRGMv2_3988_79_27
Type:
Location: 17054 - 17524 (+)
Gene ID: HRGMv2_3988_79_28
Type: STP
Location: 17837 - 18004 (+)
Gene ID: HRGMv2_3988_79_29
Type: CAZyme
Location: 18080 - 19066 (-)
Gene ID: HRGMv2_3988_79_30
Type: CAZyme
Location: 19063 - 19983 (-)
Gene ID: HRGMv2_3988_79_31
Type: pfam
Location: 20240 - 20881 (+)
Gene ID: HRGMv2_3988_79_32
Type: pfam
Location: 21435 - 21968 (+)
Gene ID: HRGMv2_3988_79_33
Type: TC
Location: 21982 - 22566 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List