PROTEIN: HRGMv2_3988_79_27
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Protein File & Metadata
Source:
HRGMv2_3988_79_27.pdb
Genome ID:
Protein ID:
HRGMv2_3988_79_27
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Protein Sequence
MCASNYGHVI RQIISNRKTT AKEVSNWQHS VTPEKLTTWV ESHDTYCNAN ESASLTDTQI 60 RLGWTIITAR QNGTPLFYSR PAGSSRENYW GNNRIGEKGN DEFKHPEVVA VNKFRKAMHG 120 MPEKIKVSTD GTVVEINRGN SGAAIVNLSK KLHSFR 156
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1Y2Y7 | CBM25 , GH13_28 | 1 | 156 | 7 | 174 | 0.7094 |
0.9382 |
| AF-H9B4I9-F1-model_v4 | GH13_28 | 1 | 156 | 224 | 409 | 0.6496 |
0.9601 |
| AF-R9S7B6-F1-model_v4 | CBM26 , GH13_28 | 1 | 156 | 75 | 260 | 0.6391 |
0.9607 |
| AF-D3ICN9-F1-model_v4 | GH13_28 | 1 | 156 | 278 | 460 | 0.6385 |
0.9703 |
| AF-A0A4P7VZ07-F1-model_v4 | GH13_28 | 1 | 156 | 270 | 453 | 0.6364 |
0.9642 |
| AF-C0M8K9-F1-model_v4 | GH13_28 | 1 | 156 | 268 | 455 | 0.6356 |
0.9643 |
| AF-B4U4Y4-F1-model_v4 | GH13_28 | 1 | 156 | 268 | 455 | 0.6355 |
0.9641 |
| AF-A0A2X3UAT7-F1-model_v4 | GH13_28 | 1 | 156 | 268 | 455 | 0.6353 |
0.9638 |
| AF-C0MFQ6-F1-model_v4 | GH13_28 | 1 | 156 | 268 | 455 | 0.6352 |
0.9636 |
| A0A1B1S8F8 | GH13_28 | 1 | 156 | 282 | 464 | 0.6347 |
0.967 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1Y2Y7 | CBM25 , GH13_28 | 1 | 156 | 7 | 174 | 0.7094 |
0.9382 |
| A0A1B1S8F8 | GH13_28 | 1 | 156 | 282 | 464 | 0.6347 |
0.967 |
| F2NSP2 | GH13_28 | 1 | 156 | 273 | 454 | 0.6235 |
0.945 |
| A0A7U6QJL7 | CBM26 , GH13_28 | 1 | 156 | 304 | 462 | 0.6022 |
0.9684 |
| A0A2S0S3D4 | CBM26 , GH13_28 | 1 | 156 | 238 | 423 | 0.5875 |
0.9627 |
| P00691 | GH13_28 | 1 | 156 | 267 | 452 | 0.5864 |
0.9597 |
| A0A292RL31 | CBM26 , GH13_28 | 1 | 156 | 295 | 450 | 0.5797 |
0.9541 |
| D4S0H6 | CBM26 , GH13_28 | 1 | 156 | 312 | 497 | 0.5787 |
0.9582 |
| UJF34860.1 | CBM25 , GH13 | 1 | 156 | 31 | 199 | 0.5568 |
0.8777 |
| Q48502 | CBM26 , GH13_28 | 1 | 156 | 276 | 461 | 0.5526 |
0.9623 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1ua7-assembly1.cif.gz_A | 1 | 156 | 223 | 408 | 0.6497 |
0.9592 |
| 1bag-assembly1.cif.gz_A | 1 | 156 | 226 | 411 | 0.6492 |
0.9601 |
| 3dc0-assembly1.cif.gz_A | 1 | 156 | 223 | 408 | 0.649 |
0.9584 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P00691-F1-model_v4 | 1 | 156 | 267 | 452 | 0.586 |
0.9591 |
| AF-P30269-F1-model_v4 | 1 | 156 | 394 | 594 | 0.5538 |
0.9676 |