Cluster: HRGMv2_3986_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3986
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3986_2 | HRGMv2_3986_2_122 | 129855 | 131549 | + | 3.A.1.120.6 |
| CAZyme | HRGMv2_3986_2 | HRGMv2_3986_2_123 | 131765 | 133618 | - | GH13_46 |
| TC | HRGMv2_3986_2 | HRGMv2_3986_2_124 | 133695 | 134969 | - | 3.D.5.1.1 |
| TC | HRGMv2_3986_2 | HRGMv2_3986_2_125 | 134990 | 135619 | - | 3.D.5.1.1 |
| TC | HRGMv2_3986_2 | HRGMv2_3986_2_126 | 135653 | 136276 | - | 3.D.5.1.1 |
| pfam | HRGMv2_3986_2 | HRGMv2_3986_2_127 | 136295 | 136996 | - | FMN_bind |
| TC | HRGMv2_3986_2 | HRGMv2_3986_2_128 | 137015 | 138175 | - | 3.D.5.1.1 |
Gene ID: HRGMv2_3986_2_122
Type: TC
Location: 129855 - 131549 (+)
Type: TC
Location: 129855 - 131549 (+)
Gene ID: HRGMv2_3986_2_123
Type: CAZyme
Location: 131765 - 133618 (-)
Type: CAZyme
Location: 131765 - 133618 (-)
Gene ID: HRGMv2_3986_2_124
Type: TC
Location: 133695 - 134969 (-)
Type: TC
Location: 133695 - 134969 (-)
Gene ID: HRGMv2_3986_2_125
Type: TC
Location: 134990 - 135619 (-)
Type: TC
Location: 134990 - 135619 (-)
Gene ID: HRGMv2_3986_2_126
Type: TC
Location: 135653 - 136276 (-)
Type: TC
Location: 135653 - 136276 (-)
Gene ID: HRGMv2_3986_2_127
Type: pfam
Location: 136295 - 136996 (-)
Type: pfam
Location: 136295 - 136996 (-)
Gene ID: HRGMv2_3986_2_128
Type: TC
Location: 137015 - 138175 (-)
Type: TC
Location: 137015 - 138175 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000318095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.