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Cluster: HRGMv2_3984_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3984_5 HRGMv2_3984_5_66 77803 79302 - 2.A.50.2.1
TC HRGMv2_3984_5 HRGMv2_3984_5_67 79635 81362 + 2.A.58.2.2
TC HRGMv2_3984_5 HRGMv2_3984_5_68 81562 83022 - 2.A.6.2.46
TC HRGMv2_3984_5 HRGMv2_3984_5_69 83012 83776 - 2.A.6.2.15
TC HRGMv2_3984_5 HRGMv2_3984_5_70 83814 86168 - 2.A.6.2.25
TC HRGMv2_3984_5 HRGMv2_3984_5_71 86182 87339 - 2.A.6.2.47
NULL(UNKNOWN) HRGMv2_3984_5 HRGMv2_3984_5_72 87448 87807 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3984_5 HRGMv2_3984_5_73 87999 88367 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3984_5 HRGMv2_3984_5_74 88495 89424 - CE1
Gene ID: HRGMv2_3984_5_66
Type: TC
Location: 77803 - 79302 (-)
Gene ID: HRGMv2_3984_5_67
Type: TC
Location: 79635 - 81362 (+)
Gene ID: HRGMv2_3984_5_68
Type: TC
Location: 81562 - 83022 (-)
Gene ID: HRGMv2_3984_5_69
Type: TC
Location: 83012 - 83776 (-)
Gene ID: HRGMv2_3984_5_70
Type: TC
Location: 83814 - 86168 (-)
Gene ID: HRGMv2_3984_5_71
Type: TC
Location: 86182 - 87339 (-)
Gene ID: HRGMv2_3984_5_72
Type:
Location: 87448 - 87807 (-)
Gene ID: HRGMv2_3984_5_73
Type:
Location: 87999 - 88367 (-)
Gene ID: HRGMv2_3984_5_74
Type: CAZyme
Location: 88495 - 89424 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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