Cluster: HRGMv2_3984_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3984
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3984_5 | HRGMv2_3984_5_1 | 174 | 2510 | + | 2.A.37.4.2 |
| CAZyme | HRGMv2_3984_5 | HRGMv2_3984_5_2 | 2613 | 4838 | - | GH163 |
| STP | HRGMv2_3984_5 | HRGMv2_3984_5_3 | 5575 | 6315 | + | Hemerythrin |
| TF | HRGMv2_3984_5 | HRGMv2_3984_5_4 | 6302 | 6931 | + | GerE |
| TC | HRGMv2_3984_5 | HRGMv2_3984_5_5 | 6987 | 8357 | - | 2.A.66.1.32 |
| STP | HRGMv2_3984_5 | HRGMv2_3984_5_6 | 8970 | 9593 | + | HTH_7 |
| CAZyme | HRGMv2_3984_5 | HRGMv2_3984_5_7 | 9682 | 11916 | - | GH78 |
Gene ID: HRGMv2_3984_5_1
Type: TC
Location: 174 - 2510 (+)
Type: TC
Location: 174 - 2510 (+)
Gene ID: HRGMv2_3984_5_2
Type: CAZyme
Location: 2613 - 4838 (-)
Type: CAZyme
Location: 2613 - 4838 (-)
Gene ID: HRGMv2_3984_5_3
Type: STP
Location: 5575 - 6315 (+)
Type: STP
Location: 5575 - 6315 (+)
Gene ID: HRGMv2_3984_5_4
Type: TF
Location: 6302 - 6931 (+)
Type: TF
Location: 6302 - 6931 (+)
Gene ID: HRGMv2_3984_5_5
Type: TC
Location: 6987 - 8357 (-)
Type: TC
Location: 6987 - 8357 (-)
Gene ID: HRGMv2_3984_5_6
Type: STP
Location: 8970 - 9593 (+)
Type: STP
Location: 8970 - 9593 (+)
Gene ID: HRGMv2_3984_5_7
Type: CAZyme
Location: 9682 - 11916 (-)
Type: CAZyme
Location: 9682 - 11916 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.