Cluster: HRGMv2_3984_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3984
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3984_17 | HRGMv2_3984_17_35 | 36232 | 37785 | + | 4.C.1.1.4 |
| TC | HRGMv2_3984_17 | HRGMv2_3984_17_36 | 37908 | 38615 | + | 3.A.25.2.1 |
| CAZyme | HRGMv2_3984_17 | HRGMv2_3984_17_37 | 38691 | 41738 | - | GH106 |
Gene ID: HRGMv2_3984_17_35
Type: TC
Location: 36232 - 37785 (+)
Type: TC
Location: 36232 - 37785 (+)
Gene ID: HRGMv2_3984_17_36
Type: TC
Location: 37908 - 38615 (+)
Type: TC
Location: 37908 - 38615 (+)
Gene ID: HRGMv2_3984_17_37
Type: CAZyme
Location: 38691 - 41738 (-)
Type: CAZyme
Location: 38691 - 41738 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.