Cluster: HRGMv2_3984_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3984
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3984_14 | HRGMv2_3984_14_5 | 3908 | 5542 | + | 1.B.9.4.4 |
| TF | HRGMv2_3984_14 | HRGMv2_3984_14_6 | 5667 | 6326 | - | GerE |
| STP | HRGMv2_3984_14 | HRGMv2_3984_14_7 | 6336 | 7271 | - | HATPase_c |
| CAZyme | HRGMv2_3984_14 | HRGMv2_3984_14_8 | 7347 | 9746 | - | GH127 |
Gene ID: HRGMv2_3984_14_5
Type: TC
Location: 3908 - 5542 (+)
Type: TC
Location: 3908 - 5542 (+)
Gene ID: HRGMv2_3984_14_6
Type: TF
Location: 5667 - 6326 (-)
Type: TF
Location: 5667 - 6326 (-)
Gene ID: HRGMv2_3984_14_7
Type: STP
Location: 6336 - 7271 (-)
Type: STP
Location: 6336 - 7271 (-)
Gene ID: HRGMv2_3984_14_8
Type: CAZyme
Location: 7347 - 9746 (-)
Type: CAZyme
Location: 7347 - 9746 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.