Cluster: HRGMv2_3984_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3984
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3984_11 | HRGMv2_3984_11_16 | 15236 | 15973 | + | 9.B.14.3.1 |
| peptidase | HRGMv2_3984_11 | HRGMv2_3984_11_17 | 16003 | 17424 | + | S12.UPW |
| pfam | HRGMv2_3984_11 | HRGMv2_3984_11_18 | 17633 | 18118 | - | MGS |
| CAZyme | HRGMv2_3984_11 | HRGMv2_3984_11_19 | 18393 | 19949 | - | GH31_19 |
Gene ID: HRGMv2_3984_11_16
Type: TC
Location: 15236 - 15973 (+)
Type: TC
Location: 15236 - 15973 (+)
Gene ID: HRGMv2_3984_11_17
Type: peptidase
Location: 16003 - 17424 (+)
Type: peptidase
Location: 16003 - 17424 (+)
Gene ID: HRGMv2_3984_11_18
Type: pfam
Location: 17633 - 18118 (-)
Type: pfam
Location: 17633 - 18118 (-)
Gene ID: HRGMv2_3984_11_19
Type: CAZyme
Location: 18393 - 19949 (-)
Type: CAZyme
Location: 18393 - 19949 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.