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Cluster: HRGMv2_3984_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_31 31492 34605 - GH2
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_32 35353 38226 + GH106
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_33 38344 39576 + GH28
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_34 39853 41352 + GH28
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_35 41392 42147 + GH28
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_36 42346 45225 + GH106
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_37 45239 46732 + GH28
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_38 46832 48316 + GH28
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_39 48337 51237 + GH106
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_40 51350 52837 + GH28
pfam HRGMv2_3984_9 HRGMv2_3984_9_41 52950 53951 - 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
TC HRGMv2_3984_9 HRGMv2_3984_9_42 54033 55784 - 2.A.1.1.3
TC HRGMv2_3984_9 HRGMv2_3984_9_43 55881 57518 + 9.B.14.3.1
sulfatase HRGMv2_3984_9 HRGMv2_3984_9_44 57754 59541 + S1_22
NULL(UNKNOWN) HRGMv2_3984_9 HRGMv2_3984_9_45 59761 60102 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3984_9 HRGMv2_3984_9_46 60337 62649 + 1.B.14.10.2
Gene ID: HRGMv2_3984_9_31
Type: CAZyme
Location: 31492 - 34605 (-)
Gene ID: HRGMv2_3984_9_32
Type: CAZyme
Location: 35353 - 38226 (+)
Gene ID: HRGMv2_3984_9_33
Type: CAZyme
Location: 38344 - 39576 (+)
Gene ID: HRGMv2_3984_9_34
Type: CAZyme
Location: 39853 - 41352 (+)
Gene ID: HRGMv2_3984_9_35
Type: CAZyme
Location: 41392 - 42147 (+)
Gene ID: HRGMv2_3984_9_36
Type: CAZyme
Location: 42346 - 45225 (+)
Gene ID: HRGMv2_3984_9_37
Type: CAZyme
Location: 45239 - 46732 (+)
Gene ID: HRGMv2_3984_9_38
Type: CAZyme
Location: 46832 - 48316 (+)
Gene ID: HRGMv2_3984_9_39
Type: CAZyme
Location: 48337 - 51237 (+)
Gene ID: HRGMv2_3984_9_40
Type: CAZyme
Location: 51350 - 52837 (+)
Gene ID: HRGMv2_3984_9_41
Type: pfam
Location: 52950 - 53951 (-)
Gene ID: HRGMv2_3984_9_42
Type: TC
Location: 54033 - 55784 (-)
Gene ID: HRGMv2_3984_9_43
Type: TC
Location: 55881 - 57518 (+)
Gene ID: HRGMv2_3984_9_44
Type: sulfatase
Location: 57754 - 59541 (+)
Gene ID: HRGMv2_3984_9_45
Type:
Location: 59761 - 60102 (+)
Gene ID: HRGMv2_3984_9_46
Type: TC
Location: 60337 - 62649 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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