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Cluster: HRGMv2_3984_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3984_9 HRGMv2_3984_9_1 3 476 + 1.A.35.1.2
peptidase HRGMv2_3984_9 HRGMv2_3984_9_2 706 2253 + S49.UPC
pfam HRGMv2_3984_9 HRGMv2_3984_9_3 2517 2804 + DUF4834
TC HRGMv2_3984_9 HRGMv2_3984_9_4 2850 3596 + 3.A.1.27.2
TC HRGMv2_3984_9 HRGMv2_3984_9_5 3598 4371 + 3.A.1.27.5
pfam HRGMv2_3984_9 HRGMv2_3984_9_6 4593 5594 + Gp_dh_N | Gp_dh_C
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_7 6026 7441 - GH29
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_8 7523 8920 - GH29
CAZyme HRGMv2_3984_9 HRGMv2_3984_9_9 9041 10495 - GH29
Gene ID: HRGMv2_3984_9_1
Type: TC
Location: 3 - 476 (+)
Gene ID: HRGMv2_3984_9_2
Type: peptidase
Location: 706 - 2253 (+)
Gene ID: HRGMv2_3984_9_3
Type: pfam
Location: 2517 - 2804 (+)
Gene ID: HRGMv2_3984_9_4
Type: TC
Location: 2850 - 3596 (+)
Gene ID: HRGMv2_3984_9_5
Type: TC
Location: 3598 - 4371 (+)
Gene ID: HRGMv2_3984_9_6
Type: pfam
Location: 4593 - 5594 (+)
Gene ID: HRGMv2_3984_9_7
Type: CAZyme
Location: 6026 - 7441 (-)
Gene ID: HRGMv2_3984_9_8
Type: CAZyme
Location: 7523 - 8920 (-)
Gene ID: HRGMv2_3984_9_9
Type: CAZyme
Location: 9041 - 10495 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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