Cluster: HRGMv2_3984_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3984
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3984_8 | HRGMv2_3984_8_40 | 49193 | 52153 | + | 3.A.12.1.1 |
| pfam | HRGMv2_3984_8 | HRGMv2_3984_8_41 | 52183 | 52833 | + | LolA |
| pfam | HRGMv2_3984_8 | HRGMv2_3984_8_42 | 52960 | 53430 | - | DUF4293 |
| CAZyme | HRGMv2_3984_8 | HRGMv2_3984_8_43 | 53455 | 54420 | - | GT2 |
Gene ID: HRGMv2_3984_8_40
Type: TC
Location: 49193 - 52153 (+)
Type: TC
Location: 49193 - 52153 (+)
Gene ID: HRGMv2_3984_8_41
Type: pfam
Location: 52183 - 52833 (+)
Type: pfam
Location: 52183 - 52833 (+)
Gene ID: HRGMv2_3984_8_42
Type: pfam
Location: 52960 - 53430 (-)
Type: pfam
Location: 52960 - 53430 (-)
Gene ID: HRGMv2_3984_8_43
Type: CAZyme
Location: 53455 - 54420 (-)
Type: CAZyme
Location: 53455 - 54420 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp019422485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.