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Cluster: HRGMv2_3984_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3984_1 HRGMv2_3984_1_26 27248 27994 + 3.A.1.15.2
CAZyme HRGMv2_3984_1 HRGMv2_3984_1_27 28010 30208 + PL8_3
NULL(UNKNOWN) HRGMv2_3984_1 HRGMv2_3984_1_28 30320 30604 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3984_1 HRGMv2_3984_1_29 30675 32138 - Carb_kinase | YjeF_N
TC HRGMv2_3984_1 HRGMv2_3984_1_30 32232 33494 - 3.D.5.1.1
TC HRGMv2_3984_1 HRGMv2_3984_1_31 33528 34160 - 3.D.5.1.1
TC HRGMv2_3984_1 HRGMv2_3984_1_32 34184 34846 - 3.D.5.1.1
pfam HRGMv2_3984_1 HRGMv2_3984_1_33 34851 35786 - FMN_bind | RUBY_RBDX
TC HRGMv2_3984_1 HRGMv2_3984_1_34 35798 36979 - 3.D.5.1.1
Gene ID: HRGMv2_3984_1_26
Type: TC
Location: 27248 - 27994 (+)
Gene ID: HRGMv2_3984_1_27
Type: CAZyme
Location: 28010 - 30208 (+)
Gene ID: HRGMv2_3984_1_28
Type:
Location: 30320 - 30604 (-)
Gene ID: HRGMv2_3984_1_29
Type: pfam
Location: 30675 - 32138 (-)
Gene ID: HRGMv2_3984_1_30
Type: TC
Location: 32232 - 33494 (-)
Gene ID: HRGMv2_3984_1_31
Type: TC
Location: 33528 - 34160 (-)
Gene ID: HRGMv2_3984_1_32
Type: TC
Location: 34184 - 34846 (-)
Gene ID: HRGMv2_3984_1_33
Type: pfam
Location: 34851 - 35786 (-)
Gene ID: HRGMv2_3984_1_34
Type: TC
Location: 35798 - 36979 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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