dbCAN Logo

Cluster: HRGMv2_3983_CGC98

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_21 HRGMv2_3983_21_25 24834 25814 - GT2
pfam HRGMv2_3983_21 HRGMv2_3983_21_26 25819 26481 - Hexapep
CAZyme HRGMv2_3983_21 HRGMv2_3983_21_27 26468 27637 - GT2
CAZyme HRGMv2_3983_21 HRGMv2_3983_21_28 27859 28851 - GT2
NULL(UNKNOWN) HRGMv2_3983_21 HRGMv2_3983_21_29 28915 30393 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_21 HRGMv2_3983_21_30 30647 32572 - 9.B.18.2.1
NULL(UNKNOWN) HRGMv2_3983_21 HRGMv2_3983_21_31 32520 32636 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_21 HRGMv2_3983_21_32 32578 34902 - 8.A.3.3.4
Gene ID: HRGMv2_3983_21_25
Type: CAZyme
Location: 24834 - 25814 (-)
Gene ID: HRGMv2_3983_21_26
Type: pfam
Location: 25819 - 26481 (-)
Gene ID: HRGMv2_3983_21_27
Type: CAZyme
Location: 26468 - 27637 (-)
Gene ID: HRGMv2_3983_21_28
Type: CAZyme
Location: 27859 - 28851 (-)
Gene ID: HRGMv2_3983_21_29
Type:
Location: 28915 - 30393 (-)
Gene ID: HRGMv2_3983_21_30
Type: TC
Location: 30647 - 32572 (-)
Gene ID: HRGMv2_3983_21_31
Type:
Location: 32520 - 32636 (-)
Gene ID: HRGMv2_3983_21_32
Type: TC
Location: 32578 - 34902 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List