PROTEIN: HRGMv2_3983_21_29
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Protein File & Metadata
Source:
HRGMv2_3983_21_29.pdb
Genome ID:
Protein ID:
HRGMv2_3983_21_29
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Protein Sequence
MLYIRMALSM VVGLYTGRVV LNTLGAEDYG INGVVGGIVG MMTFINTSMS GATSRFLIFE 60 LGKGDKKKLA NTFSMAFATH LIIALLLLII AETFGIWFLN TKLVIPENRM FAAHWVYQIS 120 ILSMLTIITQ VPYNAMLIAH EKFDIFAYFE LLSVTLKLLI VFLLVIGDFD KLILYSTLGL 180 CVTVLIAMLY RFYCKRHFEE TTLHFVYDKS IMKNMLSFSL WDLYGNCSVS MERQGRNFLI 240 NMFFGLTYNA AASVALTVAG VVQGFSGTIM QVFKPHIIKL YAAGKLQEME VACGNAMKYS 300 LILFSYLAVP VIIEADCLFS MWLVDVPPYA PDFCRFILIV TMLNINNSIL CQIIHATGRI 360 KRISLITGTI FFLHLPVYYL AFKLGADVIS CYVLEVVGLC FVILSNLLIA KRNIPTLRTH 420 YIFKNFLQAF FTILPVAVLA YFFSMQLDMS FYRMLSVSIF YAVLLSVVVY TMLLDNETRV 480 KVQKYVMRFV HL 492
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 488 | 11 | 476 | 0.8326 |
0.8806 |
| AF-H9L497-F1-model_v4 | 1 | 491 | 13 | 488 | 0.8227 |
0.8688 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 488 | 8 | 478 | 0.8199 |
0.8634 |
| AF-Q8DPI1-F1-model_v4 | 1 | 492 | 9 | 495 | 0.8127 |
0.844 |
| AF-P77377-F1-model_v4 | 1 | 491 | 12 | 488 | 0.8111 |
0.8562 |
| AF-Q58467-F1-model_v4 | 1 | 488 | 12 | 507 | 0.8 |
0.8408 |
| AF-A0A133CZZ9-F1-model_v4 | 1 | 490 | 23 | 546 | 0.7953 |
0.8582 |
| AF-A0A1A7RX54-F1-model_v4 | 1 | 490 | 14 | 525 | 0.7951 |
0.8461 |
| AF-Q8DP32-F1-model_v4 | 1 | 491 | 17 | 538 | 0.7918 |
0.8489 |
| AF-Q2G0R7-F1-model_v4 | 1 | 489 | 11 | 503 | 0.7843 |
0.8224 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 488 | 12 | 509 | 0.8182 |
0.8617 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 488 | 48 | 545 | 0.7574 |
0.8212 |
| QJC17489.1 | GT2 | 1 | 492 | 352 | 848 | 0.7332 |
0.9329 |
| QNU38870.1 | GT4 | 1 | 492 | 8 | 482 | 0.7306 |
0.8459 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 492 | 18 | 758 | 0.6645 |
0.8565 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 1 | 492 | 6 | 581 | 0.6631 |
0.841 |
| A0A4V3CWU6 | GT4 | 1 | 484 | 6 | 555 | 0.66 |
0.851 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 488 | 10 | 589 | 0.6597 |
0.8661 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 492 | 17 | 656 | 0.653 |
0.869 |
| AF-D7BDH0-F1-model_v4 | GT4 | 1 | 481 | 10 | 480 | 0.6528 |
0.8832 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 488 | 12 | 509 | 0.8182 |
0.8617 |
| A0A160T2N7 | GT28 | 1 | 488 | 48 | 545 | 0.7574 |
0.8212 |
| QJC17489.1 | GT2 | 1 | 492 | 352 | 848 | 0.7332 |
0.9329 |
| QNU38870.1 | GT4 | 1 | 492 | 8 | 482 | 0.7306 |
0.8459 |
| A0A517Z2I8 | GT2 | 1 | 492 | 18 | 758 | 0.6645 |
0.8565 |
| A0A2U8PPB3 | GT4 | 1 | 492 | 6 | 581 | 0.6631 |
0.841 |
| A0A4V3CWU6 | GT4 | 1 | 484 | 6 | 555 | 0.66 |
0.851 |
| A0A3Q9G719 | GT4 | 1 | 488 | 10 | 589 | 0.6597 |
0.8661 |
| D1BIF1 | GT4 | 1 | 492 | 17 | 656 | 0.653 |
0.869 |
| D7BDH0 | GT4 | 1 | 481 | 10 | 480 | 0.6528 |
0.8832 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 1 | 482 | 1 | 496 | 0.8219 |
0.8616 |
| 7wag-assembly1.cif.gz_A | 1 | 482 | 9 | 509 | 0.8214 |
0.8792 |
| 6nc6-assembly2.cif.gz_B | 1 | 480 | 3 | 461 | 0.7828 |
0.8325 |
| 6cc4-assembly1.cif.gz_A | 1 | 485 | 106 | 608 | 0.7438 |
0.8469 |
| 6fhz-assembly1.cif.gz_A | 2 | 419 | 11 | 437 | 0.7411 |
0.8397 |
| 5y50-assembly1.cif.gz_A | 1 | 416 | 12 | 437 | 0.7212 |
0.8279 |
| 4mlb-assembly1.cif.gz_C | 1 | 418 | 23 | 450 | 0.7095 |
0.8148 |
| 6hfb-assembly3.cif.gz_C | 1 | 418 | 23 | 449 | 0.7088 |
0.8134 |
| 6gwh-assembly1.cif.gz_A | 1 | 418 | 22 | 437 | 0.7007 |
0.7994 |
| 3wbn-assembly1.cif.gz_A | 1 | 418 | 21 | 448 | 0.6945 |
0.7981 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 1 | 492 | 8 | 503 | 0.8971 |
0.9233 |
| AF-Q48457-F1-model_v4 | 1 | 492 | 12 | 485 | 0.8179 |
0.863 |
| AF-O34674-F1-model_v4 | 1 | 489 | 10 | 539 | 0.8124 |
0.8748 |
| AF-P77377-F1-model_v4 | 1 | 491 | 12 | 488 | 0.8111 |
0.8562 |
| AF-P33699-F1-model_v4 | 1 | 488 | 15 | 486 | 0.8082 |
0.8621 |
| AF-Q58467-F1-model_v4 | 1 | 488 | 12 | 507 | 0.8 |
0.8408 |
| AF-O32273-F1-model_v4 | 1 | 492 | 13 | 483 | 0.7881 |
0.8373 |
| AF-O67658-F1-model_v4 | 1 | 492 | 9 | 498 | 0.787 |
0.8191 |
| AF-P0AF16-F1-model_v4 | 1 | 482 | 9 | 511 | 0.7849 |
0.8368 |
| AF-B4E9G3-F1-model_v4 | 1 | 481 | 8 | 514 | 0.7844 |
0.841 |