Cluster: HRGMv2_3983_CGC7
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3983_1 | HRGMv2_3983_1_116 | 214516 | 216720 | - | GH3 |
| CAZyme | HRGMv2_3983_1 | HRGMv2_3983_1_117 | 216743 | 218206 | - | GH30_1 |
| CAZyme | HRGMv2_3983_1 | HRGMv2_3983_1_118 | 218224 | 220470 | - | GH92 |
| CAZyme | HRGMv2_3983_1 | HRGMv2_3983_1_119 | 220496 | 222709 | - | GH92 |
| CAZyme | HRGMv2_3983_1 | HRGMv2_3983_1_120 | 222739 | 226320 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_3983_1 | HRGMv2_3983_1_121 | 226415 | 227872 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3983_1 | HRGMv2_3983_1_122 | 227920 | 229185 | - | CBM32 |
| pfam | HRGMv2_3983_1 | HRGMv2_3983_1_123 | 229212 | 230924 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_3983_1 | HRGMv2_3983_1_124 | 230953 | 233742 | - | 1.B.14.6.1 |
| pfam | HRGMv2_3983_1 | HRGMv2_3983_1_125 | 233764 | 235515 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_3983_1 | HRGMv2_3983_1_126 | 235527 | 238613 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_3983_1_116
Type: CAZyme
Location: 214516 - 216720 (-)
Type: CAZyme
Location: 214516 - 216720 (-)
Gene ID: HRGMv2_3983_1_117
Type: CAZyme
Location: 216743 - 218206 (-)
Type: CAZyme
Location: 216743 - 218206 (-)
Gene ID: HRGMv2_3983_1_118
Type: CAZyme
Location: 218224 - 220470 (-)
Type: CAZyme
Location: 218224 - 220470 (-)
Gene ID: HRGMv2_3983_1_119
Type: CAZyme
Location: 220496 - 222709 (-)
Type: CAZyme
Location: 220496 - 222709 (-)
Gene ID: HRGMv2_3983_1_120
Type: CAZyme
Location: 222739 - 226320 (-)
Type: CAZyme
Location: 222739 - 226320 (-)
Gene ID: HRGMv2_3983_1_121
Type:
Location: 226415 - 227872 (-)
Type:
Location: 226415 - 227872 (-)
Gene ID: HRGMv2_3983_1_122
Type: CAZyme
Location: 227920 - 229185 (-)
Type: CAZyme
Location: 227920 - 229185 (-)
Gene ID: HRGMv2_3983_1_123
Type: pfam
Location: 229212 - 230924 (-)
Type: pfam
Location: 229212 - 230924 (-)
Gene ID: HRGMv2_3983_1_124
Type: TC
Location: 230953 - 233742 (-)
Type: TC
Location: 230953 - 233742 (-)
Gene ID: HRGMv2_3983_1_125
Type: pfam
Location: 233764 - 235515 (-)
Type: pfam
Location: 233764 - 235515 (-)
Gene ID: HRGMv2_3983_1_126
Type: TC
Location: 235527 - 238613 (-)
Type: TC
Location: 235527 - 238613 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.