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PROTEIN: HRGMv2_3983_1_121

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3983_1_121.pdb
Genome ID:
HRGMv2_3983
Protein ID:
HRGMv2_3983_1_121

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKNLNLFMCC   AFAVMSCSSD   FPTYNDIKKQ   PEPVQAKTAN   EFLNSMGVCA   GIDGRGETVE 60
PSASDNMGSA   ARYKYVGVRW   MRAGTEGSYR   SNPDELAASR   KKLMDSMYRF   HELTGAKFSF 120
GIGSGAGGGK   AELEFMLDCA   NELAQHGLLI   ALEGANEPNN   FPLGGNSGNG   YDGTPGGGSD 180
TWLGVAYQQR   DLFELSRSSK   YPYLNNMPIW   SVSTIGAMND   NVGLQYLTIP   DGANTKMPDG 240
TRYATHMNCH   NYAFQNEGDW   ARPNDNQTWK   HSDPTSNNPG   DGPYVNFGVT   WNKNFKGYTN 300
EELSNLPRVV   TETGLKVFGN   FSEEIHASFL   MNIYLSQFKR   GWSNTAIYIL   RDRVDEDPVN 360
ITYGMFRGDN   TKRPAADCIR   NMTAILADDV   DAPLNPGTLT   YVIPNQPSVI   HDLLLQKTNG 420
KYYLIVWGEK   YSGGKVNATV   QFGQKVKKVN   VYSPRESADA   KQTLENTDAI   TMTYTTNPYI 480
FEIEP 485
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9I1N2-F1-model_v4 5 484 9 442 0.6772 0.7388
AF-Q54X80-F1-model_v4 11 485 5 488 0.6539 0.7133
AF-Q552H9-F1-model_v4 40 485 27 465 0.6494 0.7385
AF-Q54UB6-F1-model_v4 17 485 9 447 0.6207 0.7504
AF-A0A1C1CW80-F1-model_v4 28 484 26 449 0.6092 0.6854
AF-A0A044SQW3-F1-model_v4 28 485 134 567 0.5605 0.6817
AF-F1Q5G5-F1-model_v4 40 485 25 409 0.5414 0.6378
AF-Q7K127-F1-model_v4 41 485 28 417 0.5386 0.6339
AF-P51569-F1-model_v4 40 485 36 419 0.5366 0.6409
AF-D3ZJF9-F1-model_v4 35 485 28 420 0.5346 0.6266
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1Z4JC92 GH0 20 485 8 425 0.7757 0.852
AF-A0A1Z4JC92-F1-model_v4 GH0 20 485 8 425 0.7757 0.852
A0A2H6B812 GH0 28 485 1 400 0.7754 0.8631
AF-B2II24-F1-model_v4 GH0 10 485 22 448 0.7712 0.8502
UDF05037.1 GH0 6 484 8 474 0.7667 0.8
AF-A0A7G8BI73-F1-model_v4 GH0 27 485 26 429 0.7659 0.8718
AF-B0ULV5-F1-model_v4 GH0 26 484 13 417 0.7622 0.8551
QXG74630.1 GH0 28 485 1 433 0.7569 0.8119
AF-S0EX13-F1-model_v4 GH0 27 485 8 465 0.7548 0.7952
UUY03306.1 GH0 37 485 1 406 0.7532 0.8603
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2W1WK30 GH39 40 485 11 395 0.6997 0.8032
A0A0H3J4C5 GH39 37 483 35 411 0.6975 0.8316
S0EUH4 GH39 38 485 34 415 0.6936 0.8275
USD18578.1 GH39 37 484 41 427 0.6916 0.8196
A0A7G9P1M8 GH39 38 484 24 422 0.6899 0.791
D5DBJ2 GH39 38 484 42 428 0.6864 0.8154
B9M9D4 GH39 14 485 28 460 0.6861 0.7656
A4XXF5 GH39 11 483 9 444 0.6812 0.742
A0A4Y5W0J1 GH39 39 485 15 391 0.6795 0.7918
A4Y0B3 GH39 16 484 22 444 0.6784 0.7589
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4zn2-assembly3.cif.gz_C 23 485 1 413 0.687 0.7599
2y24-assembly1.cif.gz_A 27 484 1 383 0.6464 0.7394
6zt7-assembly1.cif.gz_A 27 485 3 490 0.6432 0.701
6zt9-assembly1.cif.gz_A-2 27 485 3 492 0.6424 0.7011
6zt9-assembly1.cif.gz_B 27 485 3 490 0.6419 0.6995
6zt9-assembly1.cif.gz_C-2 27 485 3 491 0.6418 0.7002
2vrq-assembly2.cif.gz_B 27 485 2 492 0.6409 0.7
2vrk-assembly2.cif.gz_B 27 485 2 492 0.6408 0.6997
6m5z-assembly2.cif.gz_B 28 485 1 433 0.6326 0.688
3fw6-assembly1.cif.gz_A 27 485 6 518 0.6224 0.6944
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4WTB3-F1-model_v4 23 485 3 504 0.6311 0.691
AF-B0XQB2-F1-model_v4 23 485 3 504 0.6305 0.6903
AF-B8NIX4-F1-model_v4 23 485 3 504 0.6303 0.6891
AF-Q5BDV3-F1-model_v4 22 485 2 504 0.6302 0.6879
AF-Q42656-F1-model_v4 40 485 20 378 0.5421 0.6545
AF-P51569-F1-model_v4 40 485 36 419 0.5366 0.6409
AF-P06280-F1-model_v4 40 485 36 420 0.5302 0.6372
AF-Q8VXZ7-F1-model_v4 30 485 46 430 0.5217 0.6323
AF-Q9FT97-F1-model_v4 40 485 51 409 0.4908 0.6134
AF-Q4WVZ3-F1-model_v4 40 485 29 406 0.4463 0.5945
Download Full SwissProt Results