Cluster: HRGMv2_3983_CGC40
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_10509
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3983_6 | HRGMv2_3983_6_134 | 206692 | 208128 | + | 2.A.38.1.1 |
| CAZyme | HRGMv2_3983_6 | HRGMv2_3983_6_135 | 208261 | 210315 | - | GH130_3 | GH43_34 |
| CAZyme | HRGMv2_3983_6 | HRGMv2_3983_6_136 | 210361 | 212514 | - | GH92 |
| pfam | HRGMv2_3983_6 | HRGMv2_3983_6_137 | 212809 | 214212 | - | DUF5005 |
| pfam | HRGMv2_3983_6 | HRGMv2_3983_6_138 | 214255 | 215025 | - | DUF3823 | DUF3823_C |
| TC | HRGMv2_3983_6 | HRGMv2_3983_6_139 | 215039 | 216988 | - | 8.A.46.1.5 |
| TC | HRGMv2_3983_6 | HRGMv2_3983_6_140 | 217003 | 220239 | - | 1.B.14.6.1 |
| pfam | HRGMv2_3983_6 | HRGMv2_3983_6_141 | 220261 | 221667 | - | NHL | NHL | TIG |
| NULL(UNKNOWN) | HRGMv2_3983_6 | HRGMv2_3983_6_142 | 221834 | 223594 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3983_6 | HRGMv2_3983_6_143 | 223608 | 226694 | - | CBM32 | GH2 |
| CAZyme | HRGMv2_3983_6 | HRGMv2_3983_6_144 | 226719 | 229106 | - | GH92 |
| CAZyme | HRGMv2_3983_6 | HRGMv2_3983_6_145 | 229119 | 231695 | - | GH38 |
Gene ID: HRGMv2_3983_6_134
Type: TC
Location: 206692 - 208128 (+)
Type: TC
Location: 206692 - 208128 (+)
Gene ID: HRGMv2_3983_6_135
Type: CAZyme
Location: 208261 - 210315 (-)
Type: CAZyme
Location: 208261 - 210315 (-)
Gene ID: HRGMv2_3983_6_136
Type: CAZyme
Location: 210361 - 212514 (-)
Type: CAZyme
Location: 210361 - 212514 (-)
Gene ID: HRGMv2_3983_6_137
Type: pfam
Location: 212809 - 214212 (-)
Type: pfam
Location: 212809 - 214212 (-)
Gene ID: HRGMv2_3983_6_138
Type: pfam
Location: 214255 - 215025 (-)
Type: pfam
Location: 214255 - 215025 (-)
Gene ID: HRGMv2_3983_6_139
Type: TC
Location: 215039 - 216988 (-)
Type: TC
Location: 215039 - 216988 (-)
Gene ID: HRGMv2_3983_6_140
Type: TC
Location: 217003 - 220239 (-)
Type: TC
Location: 217003 - 220239 (-)
Gene ID: HRGMv2_3983_6_141
Type: pfam
Location: 220261 - 221667 (-)
Type: pfam
Location: 220261 - 221667 (-)
Gene ID: HRGMv2_3983_6_142
Type:
Location: 221834 - 223594 (-)
Type:
Location: 221834 - 223594 (-)
Gene ID: HRGMv2_3983_6_143
Type: CAZyme
Location: 223608 - 226694 (-)
Type: CAZyme
Location: 223608 - 226694 (-)
Gene ID: HRGMv2_3983_6_144
Type: CAZyme
Location: 226719 - 229106 (-)
Type: CAZyme
Location: 226719 - 229106 (-)
Gene ID: HRGMv2_3983_6_145
Type: CAZyme
Location: 229119 - 231695 (-)
Type: CAZyme
Location: 229119 - 231695 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.