PROTEIN: HRGMv2_3983_6_142
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Protein File & Metadata
Source:
HRGMv2_3983_6_142.pdb
Genome ID:
Protein ID:
HRGMv2_3983_6_142
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Protein Sequence
MKRNSICISM LGSLLATLLF CSCRQSYLVM DMVHHNPGEA LTKSEFLEPS YLKANGYGAK 60 VFFLFEAAQF GIDWKSWDDS LFPDTSEAGR WVAEKAHIIH SKYNDAKKEG LDVYCMLDML 120 VFPSALVEKH KAELTNEKGK IDISKPYTQH CVRELMKEMF DTFPQLDGLV IRTGETYLHD 180 APYYVGNHPV QKGMHDHVTL INLLREEVCE KRNKRLFYRT WDMGKLHSLP HHYLSVTDSV 240 EPHPNLYFSL KHTMTDFWRS GVSIPQVDYD KLDTYWLEES GRYGVPFNPC IGIGKHPQIV 300 EVQCQREYEG KAAHPNYIAK GVIDGFDEFK EAGIRQPYCL NQMKNNPLLK GIWTWSRGGG 360 WGGPYITNEF WLELNAHVLA GWANDPSCSE EKLFANFARK KGLPEAETEA FRKLCLLSSE 420 GVLKGQYSAW GDVYVNWTRD DAVTGDFFLK SYFDSIIRKN KVGKYIEEKK EAVRIWKEIE 480 RISRTLHFPS EELNHFVCIS STYGRIKYEF LAVAWEIMLR GYVAGKTGAA LDEKLMADNI 540 RKYDSLWEEW NKLSRENPDC PSIYKVTSSF FGGEIGVKST VNYYRH 586
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WDE98913.1 | GH0 | 14 | 579 | 98 | 709 | 0.6903 |
0.7946 |
| AF-A0A5S9IR15-F1-model_v4 | GH0 | 21 | 586 | 44 | 616 | 0.6812 |
0.8339 |
| QRN95889.1 | GH0 | 21 | 586 | 52 | 627 | 0.6654 |
0.8298 |
| AF-A0A7L6BEL5-F1-model_v4 | GH0 | 4 | 586 | 73 | 726 | 0.6457 |
0.8224 |
| AF-A0A5Q0GW34-F1-model_v4 | GH0 | 14 | 586 | 116 | 729 | 0.6457 |
0.8256 |
| AF-A0A1C4YQM2-F1-model_v4 | GH0 | 10 | 586 | 91 | 745 | 0.6434 |
0.8298 |
| AF-A0A290Q4E1-F1-model_v4 | GH138 | 8 | 586 | 16 | 694 | 0.6419 |
0.7214 |
| AF-A0A7R7DPC5-F1-model_v4 | GH0 | 14 | 586 | 87 | 712 | 0.6419 |
0.8267 |
| AF-A0A2S1TZA1-F1-model_v4 | GH67 | 21 | 528 | 42 | 576 | 0.6402 |
0.7454 |
| AF-A0A6F8XTC7-F1-model_v4 | GH0 | 14 | 586 | 116 | 749 | 0.6398 |
0.8335 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A290Q4E1 | GH138 | 8 | 586 | 16 | 694 | 0.6419 |
0.7214 |
| A0A380YLY4 | GH67 | 18 | 574 | 62 | 670 | 0.6277 |
0.7127 |
| A0A5J6SXV5 | GH163 | 16 | 585 | 65 | 619 | 0.6203 |
0.6866 |
| A0A140HJ28 | GH67 | 14 | 540 | 73 | 667 | 0.6165 |
0.7344 |
| A0A4V0ZHA3 | GH67 | 11 | 530 | 99 | 688 | 0.6122 |
0.7487 |
| A0A142ER82 | GH67 | 12 | 569 | 101 | 719 | 0.6119 |
0.7141 |
| E4T1K8 | GH67 | 14 | 569 | 92 | 707 | 0.6115 |
0.7127 |
| A0A6H0KUB2 | GH67 | 15 | 581 | 69 | 721 | 0.6107 |
0.7034 |
| F4GLG9 | GH67 | 10 | 530 | 95 | 686 | 0.6097 |
0.7436 |
| A0A7U4ND80 | GH67 | 14 | 569 | 113 | 724 | 0.6053 |
0.7139 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6hzg-assembly1.cif.gz_A | 18 | 586 | 54 | 687 | 0.6555 |
0.742 |
| 1mqq-assembly1.cif.gz_A-2 | 14 | 540 | 75 | 675 | 0.6118 |
0.7327 |
| 6hze-assembly2.cif.gz_B | 18 | 586 | 47 | 679 | 0.6025 |
0.7412 |
| 6hzf-assembly1.cif.gz_A | 18 | 586 | 49 | 682 | 0.6002 |
0.7401 |
| 5vvv-assembly1.cif.gz_C | 26 | 584 | 1 | 423 | 0.5527 |
0.6539 |
| 5diy-assembly1.cif.gz_A | 24 | 560 | 1 | 425 | 0.5376 |
0.6592 |
| 6pv5-assembly1.cif.gz_A | 9 | 585 | 64 | 565 | 0.4715 |
0.5495 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.