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Cluster: HRGMv2_3983_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3983_5 HRGMv2_3983_5_1 186 2762 - GH115
STP HRGMv2_3983_5 HRGMv2_3983_5_2 2885 3706 - SIS
NULL(UNKNOWN) HRGMv2_3983_5 HRGMv2_3983_5_3 3774 4622 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_5 HRGMv2_3983_5_4 4670 5953 - 2.A.1.25.5
pfam HRGMv2_3983_5 HRGMv2_3983_5_5 5969 7309 - SpoIID
CAZyme HRGMv2_3983_5 HRGMv2_3983_5_6 7306 9771 - GT2
TC HRGMv2_3983_5 HRGMv2_3983_5_7 9771 11264 - 2.A.21.3.7
NULL(UNKNOWN) HRGMv2_3983_5 HRGMv2_3983_5_8 11570 11767 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3983_5 HRGMv2_3983_5_9 11983 13638 - 2.A.1.42.2
Gene ID: HRGMv2_3983_5_1
Type: CAZyme
Location: 186 - 2762 (-)
Gene ID: HRGMv2_3983_5_2
Type: STP
Location: 2885 - 3706 (-)
Gene ID: HRGMv2_3983_5_3
Type:
Location: 3774 - 4622 (-)
Gene ID: HRGMv2_3983_5_4
Type: TC
Location: 4670 - 5953 (-)
Gene ID: HRGMv2_3983_5_5
Type: pfam
Location: 5969 - 7309 (-)
Gene ID: HRGMv2_3983_5_6
Type: CAZyme
Location: 7306 - 9771 (-)
Gene ID: HRGMv2_3983_5_7
Type: TC
Location: 9771 - 11264 (-)
Gene ID: HRGMv2_3983_5_8
Type:
Location: 11570 - 11767 (-)
Gene ID: HRGMv2_3983_5_9
Type: TC
Location: 11983 - 13638 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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