PROTEIN: HRGMv2_3983_5_3
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Protein File & Metadata
Source:
HRGMv2_3983_5_3.pdb
Genome ID:
Protein ID:
HRGMv2_3983_5_3
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Protein Sequence
MILIADSGST KTDWCVVLNG TPIKRISTKG LNPFFQSEEE VQQELTHSLL PQLPEGTINS 60 VFFYGAGCTP EKAPVLRRAI ADSLPIVGNI KANSDMLAAA RGLCGHEAGI VCILGTGSNS 120 CFYNGQEIVN NISPLGFILG DEGSGAVLGK LLVGDILKNQ LSPAVKEAFL KQFDLTAPEI 180 IDRVYRQPFP NRFLASLSPF IAQHLDEPGI RQLVLNSFIT FLRRNVMQYD YTQYPAHFIG 240 SIAYFYKDIL QEAAQETGVK IGKILQSPME GLIQYHTTLS NQ 282
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F253-F1-model_v4 | 1 | 280 | 3 | 291 | 0.8014 |
0.8547 |
| AF-Q54PM7-F1-model_v4 | 1 | 282 | 5 | 319 | 0.7986 |
0.8693 |
| AF-G4VHY4-F1-model_v4 | 1 | 282 | 4 | 325 | 0.7864 |
0.8795 |
| AF-A0A0R4IUJ5-F1-model_v4 | 1 | 282 | 4 | 328 | 0.7798 |
0.8744 |
| AF-P81799-F1-model_v4 | 1 | 282 | 4 | 329 | 0.7771 |
0.8709 |
| AF-Q9QZ08-F1-model_v4 | 1 | 282 | 4 | 329 | 0.777 |
0.8709 |
| AF-Q9UJ70-F1-model_v4 | 1 | 282 | 4 | 329 | 0.7766 |
0.8713 |
| AF-A0A077YYG4-F1-model_v4 | 1 | 282 | 9 | 329 | 0.7766 |
0.8719 |
| AF-Q9VF86-F1-model_v4 | 1 | 282 | 3 | 321 | 0.7741 |
0.8725 |
| AF-U7PTM4-F1-model_v4 | 1 | 282 | 8 | 360 | 0.7671 |
0.8775 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4P7INZ0-F1-model_v4 | GH9 | 1 | 279 | 4 | 282 | 0.7812 |
0.8244 |
| URD39880.1 | CE9 | 1 | 280 | 16 | 297 | 0.5956 |
0.8527 |
| AF-A0A7L4W925-F1-model_v4 | GH170 | 1 | 273 | 3 | 294 | 0.5065 |
0.6969 |
| AF-A0A346SND6-F1-model_v4 | GH1 | 1 | 282 | 454 | 775 | 0.4932 |
0.7299 |
| AF-M4W6Q6-F1-model_v4 | GH1 | 1 | 281 | 454 | 774 | 0.4878 |
0.7232 |
| AF-A0A222W361-F1-model_v4 | GT2 | 1 | 282 | 368 | 654 | 0.4861 |
0.6859 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A165R9S5 | GH13_31 | 1 | 282 | 82 | 376 | 0.5957 |
0.7023 |
| URD39880.1 | CE9 | 1 | 280 | 16 | 297 | 0.5956 |
0.8527 |
| A0A7L4W925 | GH170 | 1 | 273 | 3 | 294 | 0.5065 |
0.6969 |
| A0A222W361 | GT2 | 1 | 282 | 368 | 654 | 0.4861 |
0.6859 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1zxo-assembly2.cif.gz_B | 1 | 280 | 1 | 280 | 0.9823 |
0.9921 |
| 1zxo-assembly1.cif.gz_F | 1 | 277 | 1 | 274 | 0.9676 |
0.9888 |
| 1zbs-assembly1.cif.gz_A-2 | 1 | 282 | 1 | 283 | 0.9611 |
0.9724 |
| 8oqw-assembly2.cif.gz_D | 1 | 278 | 1 | 278 | 0.9548 |
0.9724 |
| 8oqk-assembly1.cif.gz_A-2 | 1 | 279 | 1 | 277 | 0.9522 |
0.9707 |
| 1zxo-assembly1.cif.gz_A | 3 | 281 | 1 | 265 | 0.9507 |
0.9875 |
| 8ow9-assembly1.cif.gz_B | 1 | 277 | 1 | 277 | 0.9296 |
0.9529 |
| 8ow7-assembly3.cif.gz_D | 1 | 279 | 1 | 277 | 0.9266 |
0.9496 |
| 8ow9-assembly3.cif.gz_C | 1 | 277 | 1 | 274 | 0.9178 |
0.9471 |
| 1zc6-assembly1.cif.gz_A | 1 | 279 | 5 | 285 | 0.807 |
0.8432 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q54PM7-F1-model_v4 | 1 | 282 | 5 | 319 | 0.7986 |
0.8693 |
| AF-Q9HLV3-F1-model_v4 | 1 | 282 | 6 | 300 | 0.7813 |
0.8682 |
| AF-Q3SZM9-F1-model_v4 | 1 | 282 | 4 | 329 | 0.7772 |
0.872 |
| AF-P81799-F1-model_v4 | 1 | 282 | 4 | 329 | 0.7771 |
0.8709 |
| AF-Q9QZ08-F1-model_v4 | 1 | 282 | 4 | 329 | 0.777 |
0.8709 |
| AF-Q9UJ70-F1-model_v4 | 1 | 282 | 4 | 329 | 0.7766 |
0.8713 |
| AF-Q97ML3-F1-model_v4 | 1 | 282 | 3 | 306 | 0.7452 |
0.8048 |
| AF-Q9KUA9-F1-model_v4 | 1 | 279 | 3 | 284 | 0.743 |
0.7936 |
| AF-Q8FDU8-F1-model_v4 | 1 | 282 | 2 | 291 | 0.6954 |
0.7269 |
| AF-Q0T068-F1-model_v4 | 1 | 280 | 2 | 289 | 0.6901 |
0.7271 |