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Cluster: HRGMv2_3982_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3982_1 HRGMv2_3982_1_369 437089 439197 + 3.A.25.2.1
pfam HRGMv2_3982_1 HRGMv2_3982_1_370 439222 440085 + CTP_transf_1
pfam HRGMv2_3982_1 HRGMv2_3982_1_371 440106 440774 + PS_Dcarbxylase
TC HRGMv2_3982_1 HRGMv2_3982_1_372 440844 441950 + 2.A.86.1.8
pfam HRGMv2_3982_1 HRGMv2_3982_1_373 442000 442449 + Flavokinase
pfam HRGMv2_3982_1 HRGMv2_3982_1_374 442468 442998 + AhpC-TSA | Redoxin | Thioredoxin_8
TC HRGMv2_3982_1 HRGMv2_3982_1_375 443272 444048 + 2.A.79.2.1
pfam HRGMv2_3982_1 HRGMv2_3982_1_376 444045 444566 + ThrE_2
pfam HRGMv2_3982_1 HRGMv2_3982_1_377 444568 445290 + DUF6064
CAZyme HRGMv2_3982_1 HRGMv2_3982_1_378 445371 446993 + CBM93 | GH33
CAZyme HRGMv2_3982_1 HRGMv2_3982_1_379 447051 448202 - GH88
Gene ID: HRGMv2_3982_1_369
Type: TC
Location: 437089 - 439197 (+)
Gene ID: HRGMv2_3982_1_370
Type: pfam
Location: 439222 - 440085 (+)
Gene ID: HRGMv2_3982_1_371
Type: pfam
Location: 440106 - 440774 (+)
Gene ID: HRGMv2_3982_1_372
Type: TC
Location: 440844 - 441950 (+)
Gene ID: HRGMv2_3982_1_373
Type: pfam
Location: 442000 - 442449 (+)
Gene ID: HRGMv2_3982_1_374
Type: pfam
Location: 442468 - 442998 (+)
Gene ID: HRGMv2_3982_1_375
Type: TC
Location: 443272 - 444048 (+)
Gene ID: HRGMv2_3982_1_376
Type: pfam
Location: 444045 - 444566 (+)
Gene ID: HRGMv2_3982_1_377
Type: pfam
Location: 444568 - 445290 (+)
Gene ID: HRGMv2_3982_1_378
Type: CAZyme
Location: 445371 - 446993 (+)
Gene ID: HRGMv2_3982_1_379
Type: CAZyme
Location: 447051 - 448202 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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