Cluster: HRGMv2_3982_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3982
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3982_3 | HRGMv2_3982_3_184 | 237386 | 239245 | - | 3.A.2.3.3 |
| pfam | HRGMv2_3982_3 | HRGMv2_3982_3_185 | 239242 | 239850 | - | ATP-synt_D |
| TC | HRGMv2_3982_3 | HRGMv2_3982_3_186 | 239857 | 241176 | - | 3.A.2.3.3 |
| TC | HRGMv2_3982_3 | HRGMv2_3982_3_187 | 241185 | 242942 | - | 3.A.2.3.3 |
| pfam | HRGMv2_3982_3 | HRGMv2_3982_3_188 | 242954 | 243787 | - | DUF2764 |
| NULL(UNKNOWN) | HRGMv2_3982_3 | HRGMv2_3982_3_189 | 243792 | 244403 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3982_3 | HRGMv2_3982_3_190 | 244708 | 245547 | + | GH16_3 |
Gene ID: HRGMv2_3982_3_184
Type: TC
Location: 237386 - 239245 (-)
Type: TC
Location: 237386 - 239245 (-)
Gene ID: HRGMv2_3982_3_185
Type: pfam
Location: 239242 - 239850 (-)
Type: pfam
Location: 239242 - 239850 (-)
Gene ID: HRGMv2_3982_3_186
Type: TC
Location: 239857 - 241176 (-)
Type: TC
Location: 239857 - 241176 (-)
Gene ID: HRGMv2_3982_3_187
Type: TC
Location: 241185 - 242942 (-)
Type: TC
Location: 241185 - 242942 (-)
Gene ID: HRGMv2_3982_3_188
Type: pfam
Location: 242954 - 243787 (-)
Type: pfam
Location: 242954 - 243787 (-)
Gene ID: HRGMv2_3982_3_189
Type:
Location: 243792 - 244403 (-)
Type:
Location: 243792 - 244403 (-)
Gene ID: HRGMv2_3982_3_190
Type: CAZyme
Location: 244708 - 245547 (+)
Type: CAZyme
Location: 244708 - 245547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp022767745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.