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Cluster: HRGMv2_3980_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3980_43 HRGMv2_3980_43_114 135952 137397 + 3.A.1.30.1
TC HRGMv2_3980_43 HRGMv2_3980_43_115 137463 138338 + 2.A.7.3.57
pfam HRGMv2_3980_43 HRGMv2_3980_43_116 138475 138930 + LacAB_rpiB
pfam HRGMv2_3980_43 HRGMv2_3980_43_117 139055 140431 - UDPG_MGDP_dh | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC HRGMv2_3980_43 HRGMv2_3980_43_118 140633 143089 - 8.A.3.3.2
NULL(UNKNOWN) HRGMv2_3980_43 HRGMv2_3980_43_119 143387 143953 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3980_43 HRGMv2_3980_43_120 144068 144964 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3980_43 HRGMv2_3980_43_121 145261 146433 - GT4
CAZyme HRGMv2_3980_43 HRGMv2_3980_43_122 146465 147595 - GT4
Gene ID: HRGMv2_3980_43_114
Type: TC
Location: 135952 - 137397 (+)
Gene ID: HRGMv2_3980_43_115
Type: TC
Location: 137463 - 138338 (+)
Gene ID: HRGMv2_3980_43_116
Type: pfam
Location: 138475 - 138930 (+)
Gene ID: HRGMv2_3980_43_117
Type: pfam
Location: 139055 - 140431 (-)
Gene ID: HRGMv2_3980_43_118
Type: TC
Location: 140633 - 143089 (-)
Gene ID: HRGMv2_3980_43_119
Type:
Location: 143387 - 143953 (+)
Gene ID: HRGMv2_3980_43_120
Type:
Location: 144068 - 144964 (+)
Gene ID: HRGMv2_3980_43_121
Type: CAZyme
Location: 145261 - 146433 (-)
Gene ID: HRGMv2_3980_43_122
Type: CAZyme
Location: 146465 - 147595 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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