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Cluster: HRGMv2_3980_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3980_18 HRGMv2_3980_18_36 46665 49631 + 1.B.14.6.1
TC HRGMv2_3980_18 HRGMv2_3980_18_37 49648 51357 + 8.A.46.1.1
pfam HRGMv2_3980_18 HRGMv2_3980_18_38 51477 52748 + His_Phos_2
TC HRGMv2_3980_18 HRGMv2_3980_18_39 53099 53854 - 3.D.10.1.5
TC HRGMv2_3980_18 HRGMv2_3980_18_40 53880 55895 - 3.D.10.1.5
TC HRGMv2_3980_18 HRGMv2_3980_18_41 55920 56669 - 3.D.10.1.2
pfam HRGMv2_3980_18 HRGMv2_3980_18_42 56793 59108 - S1 | RNB | OB_RNB | OB_Dis3 | CSD2
pfam HRGMv2_3980_18 HRGMv2_3980_18_43 59304 60080 - SurE
CAZyme HRGMv2_3980_18 HRGMv2_3980_18_44 60130 61680 - GH23
Gene ID: HRGMv2_3980_18_36
Type: TC
Location: 46665 - 49631 (+)
Gene ID: HRGMv2_3980_18_37
Type: TC
Location: 49648 - 51357 (+)
Gene ID: HRGMv2_3980_18_38
Type: pfam
Location: 51477 - 52748 (+)
Gene ID: HRGMv2_3980_18_39
Type: TC
Location: 53099 - 53854 (-)
Gene ID: HRGMv2_3980_18_40
Type: TC
Location: 53880 - 55895 (-)
Gene ID: HRGMv2_3980_18_41
Type: TC
Location: 55920 - 56669 (-)
Gene ID: HRGMv2_3980_18_42
Type: pfam
Location: 56793 - 59108 (-)
Gene ID: HRGMv2_3980_18_43
Type: pfam
Location: 59304 - 60080 (-)
Gene ID: HRGMv2_3980_18_44
Type: CAZyme
Location: 60130 - 61680 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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