Cluster: HRGMv2_3899_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3899_7 | HRGMv2_3899_7_15 | 19568 | 20698 | - | GT28 |
| TC | HRGMv2_3899_7 | HRGMv2_3899_7_16 | 20759 | 21994 | - | 2.A.103.1.3 |
| pfam | HRGMv2_3899_7 | HRGMv2_3899_7_17 | 22028 | 23362 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_3899_7 | HRGMv2_3899_7_18 | 23365 | 24633 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_3899_7_15
Type: CAZyme
Location: 19568 - 20698 (-)
Type: CAZyme
Location: 19568 - 20698 (-)
Gene ID: HRGMv2_3899_7_16
Type: TC
Location: 20759 - 21994 (-)
Type: TC
Location: 20759 - 21994 (-)
Gene ID: HRGMv2_3899_7_17
Type: pfam
Location: 22028 - 23362 (-)
Type: pfam
Location: 22028 - 23362 (-)
Gene ID: HRGMv2_3899_7_18
Type: TC
Location: 23365 - 24633 (-)
Type: TC
Location: 23365 - 24633 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.