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Cluster: HRGMv2_3899_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_12 22628 24718 + GH127
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_13 24733 26547 + GH141
TC HRGMv2_3899_3 HRGMv2_3899_3_14 26574 27938 + 2.A.1.1.74
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_15 27922 30069 + GH78
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_16 30084 32780 + GH138
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_17 32795 36985 + CBM57 | CBM97 | GH137 | GH2
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_18 37239 40508 + GH2
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_19 40536 43379 + GH2
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_20 43388 46792 + GH106
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_21 46905 48344 + CE20
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_22 48543 50858 + GH139
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_23 50924 53533 + GH2
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_24 53885 55579 + PL1_2
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_25 55579 58671 + PL29
CAZyme HRGMv2_3899_3 HRGMv2_3899_3_26 59270 60799 + PL1_2
pfam HRGMv2_3899_3 HRGMv2_3899_3_27 62173 65268 + DUF6298
TC HRGMv2_3899_3 HRGMv2_3899_3_28 65815 68802 + 1.B.14.6.1
TC HRGMv2_3899_3 HRGMv2_3899_3_29 68834 70813 + 8.A.46.1.3
TC HRGMv2_3899_3 HRGMv2_3899_3_30 71360 74503 - 2.A.6.2.16
TC HRGMv2_3899_3 HRGMv2_3899_3_31 74770 75897 - 2.A.6.2.25
TC HRGMv2_3899_3 HRGMv2_3899_3_32 75980 77362 - 2.A.6.2.14
Gene ID: HRGMv2_3899_3_12
Type: CAZyme
Location: 22628 - 24718 (+)
Gene ID: HRGMv2_3899_3_13
Type: CAZyme
Location: 24733 - 26547 (+)
Gene ID: HRGMv2_3899_3_14
Type: TC
Location: 26574 - 27938 (+)
Gene ID: HRGMv2_3899_3_15
Type: CAZyme
Location: 27922 - 30069 (+)
Gene ID: HRGMv2_3899_3_16
Type: CAZyme
Location: 30084 - 32780 (+)
Gene ID: HRGMv2_3899_3_17
Type: CAZyme
Location: 32795 - 36985 (+)
Gene ID: HRGMv2_3899_3_18
Type: CAZyme
Location: 37239 - 40508 (+)
Gene ID: HRGMv2_3899_3_19
Type: CAZyme
Location: 40536 - 43379 (+)
Gene ID: HRGMv2_3899_3_20
Type: CAZyme
Location: 43388 - 46792 (+)
Gene ID: HRGMv2_3899_3_21
Type: CAZyme
Location: 46905 - 48344 (+)
Gene ID: HRGMv2_3899_3_22
Type: CAZyme
Location: 48543 - 50858 (+)
Gene ID: HRGMv2_3899_3_23
Type: CAZyme
Location: 50924 - 53533 (+)
Gene ID: HRGMv2_3899_3_24
Type: CAZyme
Location: 53885 - 55579 (+)
Gene ID: HRGMv2_3899_3_25
Type: CAZyme
Location: 55579 - 58671 (+)
Gene ID: HRGMv2_3899_3_26
Type: CAZyme
Location: 59270 - 60799 (+)
Gene ID: HRGMv2_3899_3_27
Type: pfam
Location: 62173 - 65268 (+)
Gene ID: HRGMv2_3899_3_28
Type: TC
Location: 65815 - 68802 (+)
Gene ID: HRGMv2_3899_3_29
Type: TC
Location: 68834 - 70813 (+)
Gene ID: HRGMv2_3899_3_30
Type: TC
Location: 71360 - 74503 (-)
Gene ID: HRGMv2_3899_3_31
Type: TC
Location: 74770 - 75897 (-)
Gene ID: HRGMv2_3899_3_32
Type: TC
Location: 75980 - 77362 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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