Cluster: HRGMv2_3899_CGC37
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3899
- CGC Family ID: CGCFAM_02873
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3899_114 | HRGMv2_3899_114_1 | 1 | 1041 | + | 2.A.1.1.3 |
| pfam | HRGMv2_3899_114 | HRGMv2_3899_114_2 | 1054 | 4395 | + | TPR_8 | DUF5107 |
| CAZyme | HRGMv2_3899_114 | HRGMv2_3899_114_3 | 4392 | 6377 | + | GH97 |
Gene ID: HRGMv2_3899_114_1
Type: TC
Location: 1 - 1041 (+)
Type: TC
Location: 1 - 1041 (+)
Gene ID: HRGMv2_3899_114_2
Type: pfam
Location: 1054 - 4395 (+)
Type: pfam
Location: 1054 - 4395 (+)
Gene ID: HRGMv2_3899_114_3
Type: CAZyme
Location: 4392 - 6377 (+)
Type: CAZyme
Location: 4392 - 6377 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.