Cluster: HRGMv2_3899_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3899_77 | HRGMv2_3899_77_1 | 186 | 2213 | - | GH97 |
| peptidase | HRGMv2_3899_77 | HRGMv2_3899_77_2 | 2243 | 5275 | - | M14.UNA |
| peptidase | HRGMv2_3899_77 | HRGMv2_3899_77_3 | 5272 | 6417 | - | M38.UPW |
| TC | HRGMv2_3899_77 | HRGMv2_3899_77_4 | 6433 | 7827 | - | 2.A.61.1.2 |
| TC | HRGMv2_3899_77 | HRGMv2_3899_77_5 | 7944 | 9743 | - | 8.A.46.1.6 |
| TC | HRGMv2_3899_77 | HRGMv2_3899_77_6 | 9786 | 12821 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_3899_77_1
Type: CAZyme
Location: 186 - 2213 (-)
Type: CAZyme
Location: 186 - 2213 (-)
Gene ID: HRGMv2_3899_77_2
Type: peptidase
Location: 2243 - 5275 (-)
Type: peptidase
Location: 2243 - 5275 (-)
Gene ID: HRGMv2_3899_77_3
Type: peptidase
Location: 5272 - 6417 (-)
Type: peptidase
Location: 5272 - 6417 (-)
Gene ID: HRGMv2_3899_77_4
Type: TC
Location: 6433 - 7827 (-)
Type: TC
Location: 6433 - 7827 (-)
Gene ID: HRGMv2_3899_77_5
Type: TC
Location: 7944 - 9743 (-)
Type: TC
Location: 7944 - 9743 (-)
Gene ID: HRGMv2_3899_77_6
Type: TC
Location: 9786 - 12821 (-)
Type: TC
Location: 9786 - 12821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.