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Cluster: HRGMv2_3899_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3899_75 HRGMv2_3899_75_2 643 1557 + GT8
pfam HRGMv2_3899_75 HRGMv2_3899_75_3 1603 2487 + Glyco_tranf_2_5
CAZyme HRGMv2_3899_75 HRGMv2_3899_75_4 2702 5137 - GT2 | GT4
TC HRGMv2_3899_75 HRGMv2_3899_75_5 5348 7186 - 3.A.1.106.1
pfam HRGMv2_3899_75 HRGMv2_3899_75_6 8133 8387 + OAD_gamma
TC HRGMv2_3899_75 HRGMv2_3899_75_7 8442 10286 + 3.B.1.1.6
TC HRGMv2_3899_75 HRGMv2_3899_75_8 10286 11521 + 3.B.1.1.5
Gene ID: HRGMv2_3899_75_2
Type: CAZyme
Location: 643 - 1557 (+)
Gene ID: HRGMv2_3899_75_3
Type: pfam
Location: 1603 - 2487 (+)
Gene ID: HRGMv2_3899_75_4
Type: CAZyme
Location: 2702 - 5137 (-)
Gene ID: HRGMv2_3899_75_5
Type: TC
Location: 5348 - 7186 (-)
Gene ID: HRGMv2_3899_75_6
Type: pfam
Location: 8133 - 8387 (+)
Gene ID: HRGMv2_3899_75_7
Type: TC
Location: 8442 - 10286 (+)
Gene ID: HRGMv2_3899_75_8
Type: TC
Location: 10286 - 11521 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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