Cluster: HRGMv2_3899_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3899_51 | HRGMv2_3899_51_1 | 270 | 3716 | - | GH106 |
| pfam | HRGMv2_3899_51 | HRGMv2_3899_51_2 | 4056 | 4634 | - | Hexapep | Hexapep_2 | Hexapep_2 |
| pfam | HRGMv2_3899_51 | HRGMv2_3899_51_3 | 4779 | 5777 | - | DUF362 |
| TC | HRGMv2_3899_51 | HRGMv2_3899_51_4 | 5934 | 7850 | - | 1.B.14.10.1 |
| TC | HRGMv2_3899_51 | HRGMv2_3899_51_5 | 8138 | 9598 | - | 9.B.10.1.1 |
Gene ID: HRGMv2_3899_51_1
Type: CAZyme
Location: 270 - 3716 (-)
Type: CAZyme
Location: 270 - 3716 (-)
Gene ID: HRGMv2_3899_51_2
Type: pfam
Location: 4056 - 4634 (-)
Type: pfam
Location: 4056 - 4634 (-)
Gene ID: HRGMv2_3899_51_3
Type: pfam
Location: 4779 - 5777 (-)
Type: pfam
Location: 4779 - 5777 (-)
Gene ID: HRGMv2_3899_51_4
Type: TC
Location: 5934 - 7850 (-)
Type: TC
Location: 5934 - 7850 (-)
Gene ID: HRGMv2_3899_51_5
Type: TC
Location: 8138 - 9598 (-)
Type: TC
Location: 8138 - 9598 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.