Cluster: HRGMv2_3899_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3899
- CGC Family ID: CGCFAM_01613
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3899_31 | HRGMv2_3899_31_18 | 25373 | 28861 | - | 1.B.14.6.1 |
| TC | HRGMv2_3899_31 | HRGMv2_3899_31_19 | 29197 | 29592 | + | 1.A.43.1.13 |
| CAZyme | HRGMv2_3899_31 | HRGMv2_3899_31_20 | 29576 | 31513 | + | GT51 |
Gene ID: HRGMv2_3899_31_18
Type: TC
Location: 25373 - 28861 (-)
Type: TC
Location: 25373 - 28861 (-)
Gene ID: HRGMv2_3899_31_19
Type: TC
Location: 29197 - 29592 (+)
Type: TC
Location: 29197 - 29592 (+)
Gene ID: HRGMv2_3899_31_20
Type: CAZyme
Location: 29576 - 31513 (+)
Type: CAZyme
Location: 29576 - 31513 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.