Cluster: HRGMv2_3899_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3899_24 | HRGMv2_3899_24_19 | 18917 | 20206 | + | GT4 |
| CAZyme | HRGMv2_3899_24 | HRGMv2_3899_24_20 | 20196 | 20969 | + | GT2 |
| TC | HRGMv2_3899_24 | HRGMv2_3899_24_21 | 21169 | 23706 | - | 9.B.144.1.4 |
Gene ID: HRGMv2_3899_24_19
Type: CAZyme
Location: 18917 - 20206 (+)
Type: CAZyme
Location: 18917 - 20206 (+)
Gene ID: HRGMv2_3899_24_20
Type: CAZyme
Location: 20196 - 20969 (+)
Type: CAZyme
Location: 20196 - 20969 (+)
Gene ID: HRGMv2_3899_24_21
Type: TC
Location: 21169 - 23706 (-)
Type: TC
Location: 21169 - 23706 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.