Cluster: HRGMv2_3899_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3899_18 | HRGMv2_3899_18_2 | 2353 | 3759 | + | GH28 |
| pfam | HRGMv2_3899_18 | HRGMv2_3899_18_3 | 3961 | 4770 | - | Aldolase_II |
| TC | HRGMv2_3899_18 | HRGMv2_3899_18_4 | 4790 | 5821 | - | 2.A.7.6.1 |
Gene ID: HRGMv2_3899_18_2
Type: CAZyme
Location: 2353 - 3759 (+)
Type: CAZyme
Location: 2353 - 3759 (+)
Gene ID: HRGMv2_3899_18_3
Type: pfam
Location: 3961 - 4770 (-)
Type: pfam
Location: 3961 - 4770 (-)
Gene ID: HRGMv2_3899_18_4
Type: TC
Location: 4790 - 5821 (-)
Type: TC
Location: 4790 - 5821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.