Cluster: HRGMv2_3899_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3899_9 | HRGMv2_3899_9_36 | 48297 | 50753 | + | GH2 |
| pfam | HRGMv2_3899_9 | HRGMv2_3899_9_37 | 51279 | 53648 | + | Fasciclin |
| TC | HRGMv2_3899_9 | HRGMv2_3899_9_38 | 53668 | 56970 | + | 1.B.14.6.1 |
| TC | HRGMv2_3899_9 | HRGMv2_3899_9_39 | 56990 | 58519 | + | 8.A.46.1.2 |
| pfam | HRGMv2_3899_9 | HRGMv2_3899_9_40 | 58530 | 60326 | + | Fasciclin | DUF5108 |
| pfam | HRGMv2_3899_9 | HRGMv2_3899_9_41 | 60331 | 62079 | + | Fasciclin |
| TC | HRGMv2_3899_9 | HRGMv2_3899_9_42 | 62105 | 65239 | + | 1.B.14.6.2 |
Gene ID: HRGMv2_3899_9_36
Type: CAZyme
Location: 48297 - 50753 (+)
Type: CAZyme
Location: 48297 - 50753 (+)
Gene ID: HRGMv2_3899_9_37
Type: pfam
Location: 51279 - 53648 (+)
Type: pfam
Location: 51279 - 53648 (+)
Gene ID: HRGMv2_3899_9_38
Type: TC
Location: 53668 - 56970 (+)
Type: TC
Location: 53668 - 56970 (+)
Gene ID: HRGMv2_3899_9_39
Type: TC
Location: 56990 - 58519 (+)
Type: TC
Location: 56990 - 58519 (+)
Gene ID: HRGMv2_3899_9_40
Type: pfam
Location: 58530 - 60326 (+)
Type: pfam
Location: 58530 - 60326 (+)
Gene ID: HRGMv2_3899_9_41
Type: pfam
Location: 60331 - 62079 (+)
Type: pfam
Location: 60331 - 62079 (+)
Gene ID: HRGMv2_3899_9_42
Type: TC
Location: 62105 - 65239 (+)
Type: TC
Location: 62105 - 65239 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.