Cluster: HRGMv2_3899_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3899_1 | HRGMv2_3899_1_3 | 2103 | 2672 | - | 2.A.107.1.2 |
| pfam | HRGMv2_3899_1 | HRGMv2_3899_1_4 | 2854 | 3579 | - | DUF6048 |
| pfam | HRGMv2_3899_1 | HRGMv2_3899_1_5 | 3536 | 4012 | - | DUF6452 |
| CAZyme | HRGMv2_3899_1 | HRGMv2_3899_1_6 | 4013 | 4969 | - | GT2 |
Gene ID: HRGMv2_3899_1_3
Type: TC
Location: 2103 - 2672 (-)
Type: TC
Location: 2103 - 2672 (-)
Gene ID: HRGMv2_3899_1_4
Type: pfam
Location: 2854 - 3579 (-)
Type: pfam
Location: 2854 - 3579 (-)
Gene ID: HRGMv2_3899_1_5
Type: pfam
Location: 3536 - 4012 (-)
Type: pfam
Location: 3536 - 4012 (-)
Gene ID: HRGMv2_3899_1_6
Type: CAZyme
Location: 4013 - 4969 (-)
Type: CAZyme
Location: 4013 - 4969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.