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Cluster: HRGMv2_3894_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3894_33 HRGMv2_3894_33_20 16381 17700 - 1.B.17.3.7
pfam HRGMv2_3894_33 HRGMv2_3894_33_21 17742 18839 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC HRGMv2_3894_33 HRGMv2_3894_33_22 18887 20131 - 3.A.1.122.2
TC HRGMv2_3894_33 HRGMv2_3894_33_23 20134 21384 - 3.A.1.122.2
TC HRGMv2_3894_33 HRGMv2_3894_33_24 21398 22117 - 3.A.1.122.14
STP HRGMv2_3894_33 HRGMv2_3894_33_25 22286 23254 + Glucokinase
CAZyme HRGMv2_3894_33 HRGMv2_3894_33_26 23345 25018 - CBM91 | GH43_10
pfam HRGMv2_3894_33 HRGMv2_3894_33_27 25038 26261 - DUF4861
CAZyme HRGMv2_3894_33 HRGMv2_3894_33_28 26379 27992 - GH28
Gene ID: HRGMv2_3894_33_20
Type: TC
Location: 16381 - 17700 (-)
Gene ID: HRGMv2_3894_33_21
Type: pfam
Location: 17742 - 18839 (-)
Gene ID: HRGMv2_3894_33_22
Type: TC
Location: 18887 - 20131 (-)
Gene ID: HRGMv2_3894_33_23
Type: TC
Location: 20134 - 21384 (-)
Gene ID: HRGMv2_3894_33_24
Type: TC
Location: 21398 - 22117 (-)
Gene ID: HRGMv2_3894_33_25
Type: STP
Location: 22286 - 23254 (+)
Gene ID: HRGMv2_3894_33_26
Type: CAZyme
Location: 23345 - 25018 (-)
Gene ID: HRGMv2_3894_33_27
Type: pfam
Location: 25038 - 26261 (-)
Gene ID: HRGMv2_3894_33_28
Type: CAZyme
Location: 26379 - 27992 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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