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Cluster: HRGMv2_3894_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3894_23 HRGMv2_3894_23_36 45790 46800 - 3.A.1.13.2
TC HRGMv2_3894_23 HRGMv2_3894_23_37 46797 47834 - 3.A.1.13.2
TC HRGMv2_3894_23 HRGMv2_3894_23_38 47853 49001 - 3.A.1.13.2
TF HRGMv2_3894_23 HRGMv2_3894_23_39 49377 50264 - HTH_AraC | HTH_AraC
TC HRGMv2_3894_23 HRGMv2_3894_23_40 50421 51809 + 2.A.1.1.3
STP HRGMv2_3894_23 HRGMv2_3894_23_41 51917 55213 + TPR_1
CAZyme HRGMv2_3894_23 HRGMv2_3894_23_42 55242 57614 + GH35
Gene ID: HRGMv2_3894_23_36
Type: TC
Location: 45790 - 46800 (-)
Gene ID: HRGMv2_3894_23_37
Type: TC
Location: 46797 - 47834 (-)
Gene ID: HRGMv2_3894_23_38
Type: TC
Location: 47853 - 49001 (-)
Gene ID: HRGMv2_3894_23_39
Type: TF
Location: 49377 - 50264 (-)
Gene ID: HRGMv2_3894_23_40
Type: TC
Location: 50421 - 51809 (+)
Gene ID: HRGMv2_3894_23_41
Type: STP
Location: 51917 - 55213 (+)
Gene ID: HRGMv2_3894_23_42
Type: CAZyme
Location: 55242 - 57614 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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