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Cluster: HRGMv2_3894_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3894_19 HRGMv2_3894_19_3 1793 3550 + 3.A.2.3.3
TC HRGMv2_3894_19 HRGMv2_3894_19_4 3581 4900 + 3.A.2.3.3
pfam HRGMv2_3894_19 HRGMv2_3894_19_5 4920 5525 + ATP-synt_D
TC HRGMv2_3894_19 HRGMv2_3894_19_6 5522 7330 + 3.A.2.2.2
TC HRGMv2_3894_19 HRGMv2_3894_19_7 7364 7825 + 3.A.2.2.2
CAZyme HRGMv2_3894_19 HRGMv2_3894_19_8 8007 9674 + GT3
CAZyme HRGMv2_3894_19 HRGMv2_3894_19_9 9712 12291 + GT35
Gene ID: HRGMv2_3894_19_3
Type: TC
Location: 1793 - 3550 (+)
Gene ID: HRGMv2_3894_19_4
Type: TC
Location: 3581 - 4900 (+)
Gene ID: HRGMv2_3894_19_5
Type: pfam
Location: 4920 - 5525 (+)
Gene ID: HRGMv2_3894_19_6
Type: TC
Location: 5522 - 7330 (+)
Gene ID: HRGMv2_3894_19_7
Type: TC
Location: 7364 - 7825 (+)
Gene ID: HRGMv2_3894_19_8
Type: CAZyme
Location: 8007 - 9674 (+)
Gene ID: HRGMv2_3894_19_9
Type: CAZyme
Location: 9712 - 12291 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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