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Cluster: HRGMv2_3894_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3894_18 HRGMv2_3894_18_16 13601 14896 + PL42
CAZyme HRGMv2_3894_18 HRGMv2_3894_18_17 14916 17228 + GH105 | GH154
sulfatase HRGMv2_3894_18 HRGMv2_3894_18_18 17243 18502 + S1_27
CAZyme HRGMv2_3894_18 HRGMv2_3894_18_19 18586 21093 + GH51_2
CAZyme HRGMv2_3894_18 HRGMv2_3894_18_20 21277 22224 + GH43_18
CAZyme HRGMv2_3894_18 HRGMv2_3894_18_21 22411 25416 + GH2
CAZyme HRGMv2_3894_18 HRGMv2_3894_18_22 25426 26904 + GH43_34
pfam HRGMv2_3894_18 HRGMv2_3894_18_23 26897 27787 - NAD_kinase | NAD_kinase_C
pfam HRGMv2_3894_18 HRGMv2_3894_18_24 27895 28608 + PdxJ
TC HRGMv2_3894_18 HRGMv2_3894_18_25 28611 29330 + 1.A.30.2.9
Gene ID: HRGMv2_3894_18_16
Type: CAZyme
Location: 13601 - 14896 (+)
Gene ID: HRGMv2_3894_18_17
Type: CAZyme
Location: 14916 - 17228 (+)
Gene ID: HRGMv2_3894_18_18
Type: sulfatase
Location: 17243 - 18502 (+)
Gene ID: HRGMv2_3894_18_19
Type: CAZyme
Location: 18586 - 21093 (+)
Gene ID: HRGMv2_3894_18_20
Type: CAZyme
Location: 21277 - 22224 (+)
Gene ID: HRGMv2_3894_18_21
Type: CAZyme
Location: 22411 - 25416 (+)
Gene ID: HRGMv2_3894_18_22
Type: CAZyme
Location: 25426 - 26904 (+)
Gene ID: HRGMv2_3894_18_23
Type: pfam
Location: 26897 - 27787 (-)
Gene ID: HRGMv2_3894_18_24
Type: pfam
Location: 27895 - 28608 (+)
Gene ID: HRGMv2_3894_18_25
Type: TC
Location: 28611 - 29330 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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