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Cluster: HRGMv2_3894_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3894_14 HRGMv2_3894_14_18 19847 20734 - GH73
pfam HRGMv2_3894_14 HRGMv2_3894_14_19 20857 21336 + dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC HRGMv2_3894_14 HRGMv2_3894_14_20 21450 23072 - 3.A.1.121.4
TF HRGMv2_3894_14 HRGMv2_3894_14_21 23155 23913 - LytTR
TC HRGMv2_3894_14 HRGMv2_3894_14_22 23910 24953 - 9.B.33.1.1
pfam HRGMv2_3894_14 HRGMv2_3894_14_23 24963 25877 - HlyD_3 | HlyD_D23
TC HRGMv2_3894_14 HRGMv2_3894_14_24 25897 30231 - 2.A.6.1.5
Gene ID: HRGMv2_3894_14_18
Type: CAZyme
Location: 19847 - 20734 (-)
Gene ID: HRGMv2_3894_14_19
Type: pfam
Location: 20857 - 21336 (+)
Gene ID: HRGMv2_3894_14_20
Type: TC
Location: 21450 - 23072 (-)
Gene ID: HRGMv2_3894_14_21
Type: TF
Location: 23155 - 23913 (-)
Gene ID: HRGMv2_3894_14_22
Type: TC
Location: 23910 - 24953 (-)
Gene ID: HRGMv2_3894_14_23
Type: pfam
Location: 24963 - 25877 (-)
Gene ID: HRGMv2_3894_14_24
Type: TC
Location: 25897 - 30231 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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