dbCAN Logo

Cluster: HRGMv2_3894_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3894_1 HRGMv2_3894_1_151 166968 168317 - 1.A.11.1.5
NULL(UNKNOWN) HRGMv2_3894_1 HRGMv2_3894_1_152 168593 168694 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3894_1 HRGMv2_3894_1_153 168659 170860 - GH36
CAZyme HRGMv2_3894_1 HRGMv2_3894_1_154 171069 172502 + CE20
pfam HRGMv2_3894_1 HRGMv2_3894_1_155 172592 173029 - HSP20 | ArsA_HSP20
pfam HRGMv2_3894_1 HRGMv2_3894_1_156 173382 173903 + Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_3894_1 HRGMv2_3894_1_157 174010 174972 + 2.A.115.1.2
Gene ID: HRGMv2_3894_1_151
Type: TC
Location: 166968 - 168317 (-)
Gene ID: HRGMv2_3894_1_152
Type:
Location: 168593 - 168694 (+)
Gene ID: HRGMv2_3894_1_153
Type: CAZyme
Location: 168659 - 170860 (-)
Gene ID: HRGMv2_3894_1_154
Type: CAZyme
Location: 171069 - 172502 (+)
Gene ID: HRGMv2_3894_1_155
Type: pfam
Location: 172592 - 173029 (-)
Gene ID: HRGMv2_3894_1_156
Type: pfam
Location: 173382 - 173903 (+)
Gene ID: HRGMv2_3894_1_157
Type: TC
Location: 174010 - 174972 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List