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Cluster: HRGMv2_3894_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3894_10 HRGMv2_3894_10_58 72438 74147 + GT83
pfam HRGMv2_3894_10 HRGMv2_3894_10_59 74196 74576 + GtrA_DPMS_TM
CAZyme HRGMv2_3894_10 HRGMv2_3894_10_60 74573 75526 + GT2
TC HRGMv2_3894_10 HRGMv2_3894_10_61 75670 77502 + 3.A.1.106.1
CAZyme HRGMv2_3894_10 HRGMv2_3894_10_62 77720 78703 + GT2
CAZyme HRGMv2_3894_10 HRGMv2_3894_10_63 78759 79721 - GT2
CAZyme HRGMv2_3894_10 HRGMv2_3894_10_64 79747 80676 - GT8
CAZyme HRGMv2_3894_10 HRGMv2_3894_10_65 80681 81586 - GT2
CAZyme HRGMv2_3894_10 HRGMv2_3894_10_66 81594 82436 - GT11
CAZyme HRGMv2_3894_10 HRGMv2_3894_10_67 82463 83362 - GT2
Gene ID: HRGMv2_3894_10_58
Type: CAZyme
Location: 72438 - 74147 (+)
Gene ID: HRGMv2_3894_10_59
Type: pfam
Location: 74196 - 74576 (+)
Gene ID: HRGMv2_3894_10_60
Type: CAZyme
Location: 74573 - 75526 (+)
Gene ID: HRGMv2_3894_10_61
Type: TC
Location: 75670 - 77502 (+)
Gene ID: HRGMv2_3894_10_62
Type: CAZyme
Location: 77720 - 78703 (+)
Gene ID: HRGMv2_3894_10_63
Type: CAZyme
Location: 78759 - 79721 (-)
Gene ID: HRGMv2_3894_10_64
Type: CAZyme
Location: 79747 - 80676 (-)
Gene ID: HRGMv2_3894_10_65
Type: CAZyme
Location: 80681 - 81586 (-)
Gene ID: HRGMv2_3894_10_66
Type: CAZyme
Location: 81594 - 82436 (-)
Gene ID: HRGMv2_3894_10_67
Type: CAZyme
Location: 82463 - 83362 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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