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Cluster: HRGMv2_3894_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3894_8 HRGMv2_3894_8_8 6015 7250 + 3.B.1.1.1
pfam HRGMv2_3894_8 HRGMv2_3894_8_9 7463 8719 - PGK
CAZyme HRGMv2_3894_8 HRGMv2_3894_8_10 8929 10443 - CBM91 | GH43_9
TC HRGMv2_3894_8 HRGMv2_3894_8_11 10619 11941 + 2.A.66.1.28
TC HRGMv2_3894_8 HRGMv2_3894_8_12 12011 13342 + 3.A.5.1.1
CAZyme HRGMv2_3894_8 HRGMv2_3894_8_13 13446 14636 - GH171
STP HRGMv2_3894_8 HRGMv2_3894_8_14 14687 15223 + HD
TC HRGMv2_3894_8 HRGMv2_3894_8_15 15312 18080 + 1.B.42.1.8
pfam HRGMv2_3894_8 HRGMv2_3894_8_16 18101 18763 - UDG
pfam HRGMv2_3894_8 HRGMv2_3894_8_17 18887 19927 - AsnA
CAZyme HRGMv2_3894_8 HRGMv2_3894_8_18 20546 22123 + CBM91 | GH43_12
Gene ID: HRGMv2_3894_8_8
Type: TC
Location: 6015 - 7250 (+)
Gene ID: HRGMv2_3894_8_9
Type: pfam
Location: 7463 - 8719 (-)
Gene ID: HRGMv2_3894_8_10
Type: CAZyme
Location: 8929 - 10443 (-)
Gene ID: HRGMv2_3894_8_11
Type: TC
Location: 10619 - 11941 (+)
Gene ID: HRGMv2_3894_8_12
Type: TC
Location: 12011 - 13342 (+)
Gene ID: HRGMv2_3894_8_13
Type: CAZyme
Location: 13446 - 14636 (-)
Gene ID: HRGMv2_3894_8_14
Type: STP
Location: 14687 - 15223 (+)
Gene ID: HRGMv2_3894_8_15
Type: TC
Location: 15312 - 18080 (+)
Gene ID: HRGMv2_3894_8_16
Type: pfam
Location: 18101 - 18763 (-)
Gene ID: HRGMv2_3894_8_17
Type: pfam
Location: 18887 - 19927 (-)
Gene ID: HRGMv2_3894_8_18
Type: CAZyme
Location: 20546 - 22123 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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