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Cluster: HRGMv2_3894_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3894_7 HRGMv2_3894_7_55 72791 73954 - 2.A.1.7.17
CAZyme HRGMv2_3894_7 HRGMv2_3894_7_56 74193 76064 - GH32
NULL(UNKNOWN) HRGMv2_3894_7 HRGMv2_3894_7_57 76154 78631 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3894_7 HRGMv2_3894_7_58 78795 80600 - GH32
pfam HRGMv2_3894_7 HRGMv2_3894_7_59 80633 82369 - SusD_RagB | SusD-like_3
TC HRGMv2_3894_7 HRGMv2_3894_7_60 82388 85510 - 1.B.14.6.1
pfam HRGMv2_3894_7 HRGMv2_3894_7_61 85706 86530 - LGT
CAZyme HRGMv2_3894_7 HRGMv2_3894_7_62 86628 88229 - GH43_35
CAZyme HRGMv2_3894_7 HRGMv2_3894_7_63 88394 91372 - GH115
Gene ID: HRGMv2_3894_7_55
Type: TC
Location: 72791 - 73954 (-)
Gene ID: HRGMv2_3894_7_56
Type: CAZyme
Location: 74193 - 76064 (-)
Gene ID: HRGMv2_3894_7_57
Type:
Location: 76154 - 78631 (-)
Gene ID: HRGMv2_3894_7_58
Type: CAZyme
Location: 78795 - 80600 (-)
Gene ID: HRGMv2_3894_7_59
Type: pfam
Location: 80633 - 82369 (-)
Gene ID: HRGMv2_3894_7_60
Type: TC
Location: 82388 - 85510 (-)
Gene ID: HRGMv2_3894_7_61
Type: pfam
Location: 85706 - 86530 (-)
Gene ID: HRGMv2_3894_7_62
Type: CAZyme
Location: 86628 - 88229 (-)
Gene ID: HRGMv2_3894_7_63
Type: CAZyme
Location: 88394 - 91372 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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