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Cluster: HRGMv2_3894_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3894_6 HRGMv2_3894_6_89 126865 128154 + GH105
pfam HRGMv2_3894_6 HRGMv2_3894_6_90 128238 128786 - Ribosomal_S16
peptidase HRGMv2_3894_6 HRGMv2_3894_6_91 128903 129742 - S09.UPW
TC HRGMv2_3894_6 HRGMv2_3894_6_92 129779 131773 - 2.A.67.4.2
pfam HRGMv2_3894_6 HRGMv2_3894_6_93 131790 132800 - ApbE
TC HRGMv2_3894_6 HRGMv2_3894_6_94 132820 133386 - 2.A.107.1.2
pfam HRGMv2_3894_6 HRGMv2_3894_6_95 133389 134045 - DUF6048
pfam HRGMv2_3894_6 HRGMv2_3894_6_96 134047 134589 - DUF6452
CAZyme HRGMv2_3894_6 HRGMv2_3894_6_97 134592 135542 - GT2
Gene ID: HRGMv2_3894_6_89
Type: CAZyme
Location: 126865 - 128154 (+)
Gene ID: HRGMv2_3894_6_90
Type: pfam
Location: 128238 - 128786 (-)
Gene ID: HRGMv2_3894_6_91
Type: peptidase
Location: 128903 - 129742 (-)
Gene ID: HRGMv2_3894_6_92
Type: TC
Location: 129779 - 131773 (-)
Gene ID: HRGMv2_3894_6_93
Type: pfam
Location: 131790 - 132800 (-)
Gene ID: HRGMv2_3894_6_94
Type: TC
Location: 132820 - 133386 (-)
Gene ID: HRGMv2_3894_6_95
Type: pfam
Location: 133389 - 134045 (-)
Gene ID: HRGMv2_3894_6_96
Type: pfam
Location: 134047 - 134589 (-)
Gene ID: HRGMv2_3894_6_97
Type: CAZyme
Location: 134592 - 135542 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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