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Cluster: HRGMv2_3894_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3894_4 HRGMv2_3894_4_97 119755 121053 + GH29
TC HRGMv2_3894_4 HRGMv2_3894_4_98 121079 121828 + 9.B.158.1.1
pfam HRGMv2_3894_4 HRGMv2_3894_4_99 121833 124532 - Transglut_core
CAZyme HRGMv2_3894_4 HRGMv2_3894_4_100 124679 127789 + GH2
pfam HRGMv2_3894_4 HRGMv2_3894_4_101 127876 128958 - AA_kinase | PUA
pfam HRGMv2_3894_4 HRGMv2_3894_4_102 129124 129906 + S6PP | Hydrolase_3
CAZyme HRGMv2_3894_4 HRGMv2_3894_4_103 130004 132370 - GH2
Gene ID: HRGMv2_3894_4_97
Type: CAZyme
Location: 119755 - 121053 (+)
Gene ID: HRGMv2_3894_4_98
Type: TC
Location: 121079 - 121828 (+)
Gene ID: HRGMv2_3894_4_99
Type: pfam
Location: 121833 - 124532 (-)
Gene ID: HRGMv2_3894_4_100
Type: CAZyme
Location: 124679 - 127789 (+)
Gene ID: HRGMv2_3894_4_101
Type: pfam
Location: 127876 - 128958 (-)
Gene ID: HRGMv2_3894_4_102
Type: pfam
Location: 129124 - 129906 (+)
Gene ID: HRGMv2_3894_4_103
Type: CAZyme
Location: 130004 - 132370 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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