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Cluster: HRGMv2_3894_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3894_1 HRGMv2_3894_1_69 78536 79912 + 2.A.66.1.33
TC HRGMv2_3894_1 HRGMv2_3894_1_70 79979 81886 + 3.D.1.5.1
STP HRGMv2_3894_1 HRGMv2_3894_1_71 81890 83659 + Fer4
TC HRGMv2_3894_1 HRGMv2_3894_1_72 83664 84140 + 3.D.1.5.1
STP HRGMv2_3894_1 HRGMv2_3894_1_73 84224 84640 - Nitro_FeMo-Co
TC HRGMv2_3894_1 HRGMv2_3894_1_74 84800 85804 + 8.A.5.1.3
CAZyme HRGMv2_3894_1 HRGMv2_3894_1_75 85809 86909 - CE2
Gene ID: HRGMv2_3894_1_69
Type: TC
Location: 78536 - 79912 (+)
Gene ID: HRGMv2_3894_1_70
Type: TC
Location: 79979 - 81886 (+)
Gene ID: HRGMv2_3894_1_71
Type: STP
Location: 81890 - 83659 (+)
Gene ID: HRGMv2_3894_1_72
Type: TC
Location: 83664 - 84140 (+)
Gene ID: HRGMv2_3894_1_73
Type: STP
Location: 84224 - 84640 (-)
Gene ID: HRGMv2_3894_1_74
Type: TC
Location: 84800 - 85804 (+)
Gene ID: HRGMv2_3894_1_75
Type: CAZyme
Location: 85809 - 86909 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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