Cluster: HRGMv2_3893_CGC21
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3893
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3893_18 | HRGMv2_3893_18_15 | 17522 | 20722 | + | 1.B.14.6.1 |
| pfam | HRGMv2_3893_18 | HRGMv2_3893_18_16 | 20753 | 22738 | + | SusD_RagB |
| pfam | HRGMv2_3893_18 | HRGMv2_3893_18_17 | 22764 | 24104 | + | Big_2 |
| CAZyme | HRGMv2_3893_18 | HRGMv2_3893_18_18 | 24163 | 25608 | + | GH29 |
| CAZyme | HRGMv2_3893_18 | HRGMv2_3893_18_19 | 25646 | 26764 | + | GH105 |
| CAZyme | HRGMv2_3893_18 | HRGMv2_3893_18_20 | 26777 | 28885 | + | GH2 |
| pfam | HRGMv2_3893_18 | HRGMv2_3893_18_21 | 28999 | 30303 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1 |
| TC | HRGMv2_3893_18 | HRGMv2_3893_18_22 | 30307 | 31428 | - | 9.B.146.1.4 |
| pfam | HRGMv2_3893_18 | HRGMv2_3893_18_23 | 31491 | 32810 | - | NTP_transferase |
| CAZyme | HRGMv2_3893_18 | HRGMv2_3893_18_24 | 32900 | 34030 | - | GT4 |
| pfam | HRGMv2_3893_18 | HRGMv2_3893_18_25 | 34040 | 34546 | - | Hexapep |
| CAZyme | HRGMv2_3893_18 | HRGMv2_3893_18_26 | 34548 | 35591 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_3893_18 | HRGMv2_3893_18_27 | 35579 | 36724 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3893_18 | HRGMv2_3893_18_28 | 36714 | 37964 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3893_18 | HRGMv2_3893_18_29 | 37961 | 38854 | - | GT111 |
Gene ID: HRGMv2_3893_18_15
Type: TC
Location: 17522 - 20722 (+)
Type: TC
Location: 17522 - 20722 (+)
Gene ID: HRGMv2_3893_18_16
Type: pfam
Location: 20753 - 22738 (+)
Type: pfam
Location: 20753 - 22738 (+)
Gene ID: HRGMv2_3893_18_17
Type: pfam
Location: 22764 - 24104 (+)
Type: pfam
Location: 22764 - 24104 (+)
Gene ID: HRGMv2_3893_18_18
Type: CAZyme
Location: 24163 - 25608 (+)
Type: CAZyme
Location: 24163 - 25608 (+)
Gene ID: HRGMv2_3893_18_19
Type: CAZyme
Location: 25646 - 26764 (+)
Type: CAZyme
Location: 25646 - 26764 (+)
Gene ID: HRGMv2_3893_18_20
Type: CAZyme
Location: 26777 - 28885 (+)
Type: CAZyme
Location: 26777 - 28885 (+)
Gene ID: HRGMv2_3893_18_21
Type: pfam
Location: 28999 - 30303 (-)
Type: pfam
Location: 28999 - 30303 (-)
Gene ID: HRGMv2_3893_18_22
Type: TC
Location: 30307 - 31428 (-)
Type: TC
Location: 30307 - 31428 (-)
Gene ID: HRGMv2_3893_18_23
Type: pfam
Location: 31491 - 32810 (-)
Type: pfam
Location: 31491 - 32810 (-)
Gene ID: HRGMv2_3893_18_24
Type: CAZyme
Location: 32900 - 34030 (-)
Type: CAZyme
Location: 32900 - 34030 (-)
Gene ID: HRGMv2_3893_18_25
Type: pfam
Location: 34040 - 34546 (-)
Type: pfam
Location: 34040 - 34546 (-)
Gene ID: HRGMv2_3893_18_26
Type: CAZyme
Location: 34548 - 35591 (-)
Type: CAZyme
Location: 34548 - 35591 (-)
Gene ID: HRGMv2_3893_18_27
Type:
Location: 35579 - 36724 (-)
Type:
Location: 35579 - 36724 (-)
Gene ID: HRGMv2_3893_18_28
Type:
Location: 36714 - 37964 (-)
Type:
Location: 36714 - 37964 (-)
Gene ID: HRGMv2_3893_18_29
Type: CAZyme
Location: 37961 - 38854 (-)
Type: CAZyme
Location: 37961 - 38854 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.